Lactobacillus gasseri ATCC 33323: LGAS_0004
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Entry
LGAS_0004 CDS
T00410
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
lga
Lactobacillus gasseri ATCC 33323
Pathway
lga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LGAS_0004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lga03400
]
LGAS_0004
DNA repair and recombination proteins [BR:
lga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LGAS_0004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
DUF2813
AAA_29
Glyco_transf_88
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
ABJ59421
UniProt:
Q047F1
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All DBs
Position
3242..4366
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AA seq
374 aa
AA seq
DB search
MYLANFELKDFRNFKELKTDFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHRTNSDKEL
IRFGSKFAGLQGRVHKSQLQVELKLRLTANGKKAWVNRLEQKKLSAYVGQMNAILFSPED
LALVKGAPSVRRRFMDLEFGQINSEYLYFSSQYRQVLQQRNNYLKQLSIKKANDQVFLDV
LSDQLAGIAAEIISRRIKYIKKLNSYAKAAHSEISGQAEKLQIFYRPSVKEIIPEDNVET
IYRKVITSYKKNRPNEIRKGTTLSGPHRDDLEFLINEKNAHDFASQGQQRTISLSVKLAE
IQLVHELTQEYPILLLDDVMSELDHRRQSRLLNYIHGKTQTFITTTDLEGISWEIVKEPK
VYHISAGTISAKES
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcgcaaactttgaattgaaagactttaggaattttaaagaattaaaaacagat
tttgatcctcatgtaaatatttttattggtccgaatgcccaaggaaaaactaatttactt
gaggcaatttattttttagccctaacacgatcccatcgaactaatagcgataaagaatta
attcgctttggcagtaaatttgccggtttacaaggtcgagttcataaaagccaactgcaa
gtagagcttaaattacgtttaacagctaatggaaaaaaggcttgggtaaatcgcttggag
caaaagaagctttctgcttatgttgggcaaatgaatgcaattttgttttctccagaagat
ttagccctagttaagggagcaccatctgttagacggagatttatggatttagagtttggg
cagattaattcagaatatctatatttttcaagtcagtatcgtcaggtactgcaacagaga
aacaattatttaaagcaactaagcatcaaaaaagcaaatgatcaagtttttttagatgtc
ttatctgatcagctggcaggaattgcagcagagataatatcgcgaagaataaaatacatc
aaaaaactcaattcctacgctaaagctgctcatagcgagattagtggtcaagctgaaaaa
ttgcagattttttaccgtccatcagttaaggaaattatcccagaggataatgtagagacc
atttatcgaaaagttattactagttataagaaaaatcgtcctaatgaaattcgaaagggc
actactctaagtggcccgcatcgagatgacttggagtttttaattaatgaaaaaaatgcc
catgattttgcatctcaaggacagcaacggacgatttctctaagcgtcaagttagccgag
attcaattagtacatgaattgacgcaagaatatccaattctgttattagatgatgtgatg
agtgagttagatcatcgaagacagagccgtttattgaactatattcatggcaaaacgcaa
acatttataacaacgacagatttagaaggtatttcttgggaaatcgtgaaggaacctaag
gtttatcacatttctgctggaacgatcagtgcaaaggagagttaa
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