Lactobacillus gasseri ATCC 33323: LGAS_0225
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Entry
LGAS_0225 CDS
T00410
Name
(GenBank) DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lga
Lactobacillus gasseri ATCC 33323
Pathway
lga03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LGAS_0225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lga03021
]
LGAS_0225
03400 DNA repair and recombination proteins [BR:
lga03400
]
LGAS_0225
Transcription machinery [BR:
lga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LGAS_0225
DNA repair and recombination proteins [BR:
lga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LGAS_0225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
Virulence_fact
HTH_CLF_N
Motif
Other DBs
NCBI-ProteinID:
ABJ59634
UniProt:
A0A830TN19
LinkDB
All DBs
Position
260293..260853
Genome browser
AA seq
186 aa
AA seq
DB search
MKGRATVGLDDFKGQNKDELSMIEVARAILQDSGKRMAFADIVNAVQNFLGKSDEEIRER
LPQFYTDMNTDGEFISMGDNVWALRSWFPYESVDEEVNHPEDEDDVPRKKHHKKVNAFIG
DSDDDDIIDYDSDDPEDEDLDVDDDDNNEDDYSDDDLDDADDNELDDGIEGQLSELHQDD
LDDDDD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaggacgtgccactgtggggttagatgattttaaaggccaaaataaagacgaattg
tcaatgatcgaagttgctcgtgcaattttacaagatagcggcaagcgaatggcctttgct
gatatcgttaacgccgtccagaactttctgggtaagagtgacgaagaaattcgtgagcgt
ttgccacaattttacactgatatgaacactgatggtgaattcatttcaatgggtgataat
gtttgggcattgcgttcttggttcccatatgaatctgttgatgaagaagtaaaccatcca
gaagatgaagatgatgtgccacgtaagaagcaccacaagaaggttaacgcctttattggt
gattctgacgatgacgacattattgactacgattcagatgatccagaagatgaagatttg
gacgttgatgacgacgacaataatgaagatgattactcagatgatgatcttgacgatgct
gacgacaatgaattagatgatggtatcgaaggacaattatcagaacttcaccaagatgat
cttgatgatgatgacgattaa
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