Lactobacillus gasseri ATCC 33323: LGAS_0284
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Entry
LGAS_0284 CDS
T00410
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lga
Lactobacillus gasseri ATCC 33323
Pathway
lga03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LGAS_0284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lga03021
]
LGAS_0284
03400 DNA repair and recombination proteins [BR:
lga03400
]
LGAS_0284
Enzymes [BR:
lga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LGAS_0284
Transcription machinery [BR:
lga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LGAS_0284
DNA repair and recombination proteins [BR:
lga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LGAS_0284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ABJ59690
UniProt:
Q046D2
LinkDB
All DBs
Position
321501..325139
Genome browser
AA seq
1212 aa
AA seq
DB search
MFSLLGHAVNYGSHRTRRSFSRIKEVLKLPNLTDVQTQSYKWFLNEGIREMFDDIMPISD
FSGKLSLEFVDYKLLKPKYTLEEARDHDANYSAPLHVTLKLTNHETGEIKTQDVFFGEFP
LMTDSGTFVINGAERIIVSQLVRSPGVYYHSDFDKNGRQIFGATVIPNRGAWLEYETDAK
DLAYVRIDRTRKLPLTVLIRALGFGSDSEVADMFGESDSLRFTLEKDIHKNPADSRVAEA
LKDIYERLRPGEPKTTDSSRSLLYARFFDPRRYDLAPVGRYKINKKLSLKNRLLRQTLAE
TLADPDTGEIIAKKGDVVTHEILDKLSPYLDRDDFKMVTYEPSKEGVLPDPVTVQEIKVY
SKVDPERVIKLMSNGHIADDVKHLTPADVLASINYFFNLQDNIGTTDDIDHLGNRRIRRV
GELLQNQFRIGLARMERVVRERMSIQDISTVTPQQLINIRPVVASVKEFFGSSQLSQFMD
QNNPLGELTHKRRMSALGPGGLSRDRAGYEVRDVHYTHYGRLCPIETPEGPNIGLINSLA
TYAIVNKYGFIETPYRRVSWDTHKVTDKIDYLTADVEDNYIIAGANAPLNEDGSFKDKIV
LARHKEDNLEVTPDKIDYMDVIPKQVVSVTSACIPFLENDDSNRALMGANHQRQAVPLIN
PHAPIVGTGMEYRAAHDSGDALVAKAPGVVEYVDANEIRIRRDDDTLDKYVLEKFRRSNA
TKNYNQTPAVKQGERVVADEVIADGPAMENGELALGQNPIIAFLTWNMYNYEDAVMISER
MVKDDVYTSIHIEDYESEARDTKLGPEEITREIPNVGEDALKDLDEEGIVRIGAEVQDGD
ILVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVQNVQVFTREAGDE
LPPGVNKMVRVYIVQKRKIQVGDKMSGRHGNKGTIALVCPEEDMPYLPDGRPVDICLNPM
GVPSRMNIGQVLELHLGIAAKQLGIHVATPVFDGASEDDMWNMVREAGIGKDGKTVLYDG
RTGEPFHNRVSVGIMYYLKLTHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTYKSDDVVGRVKAYEAIVKGERIPKPGVPESFRVLVKELQSLGL
DIKVLDMDHKEIELRDMDDDSNDHFNIDTLSKLAEQQEKKKLAEEAAKKDDKSAEPVDQS
DSSTSSDDKVSK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgttttctttgttaggacacgctgtgaactacggtagtcaccggacaagacgtagcttc
tctcgaattaaagaagtattgaagttacctaacttgactgatgtgcaaacgcaatcttac
aagtggtttcttaatgaaggtattcgtgaaatgtttgacgacattatgccgatttcagac
ttttcaggaaaactttctttagagtttgttgactacaaacttctgaagccaaaatacact
cttgaagaagcacgtgatcacgatgcaaattactctgctcctcttcatgtaactttaaag
ttaaccaaccatgaaactggagaaattaagactcaagatgtcttcttcggagaatttcca
ttaatgactgattcaggtactttcgttattaatggtgctgagagaattattgtttctcag
cttgttagatctcctggtgtttactaccattcagattttgataaaaatggtcgccaaatt
ttcggtgctacagttattcctaaccgtggtgcatggcttgaatatgaaactgatgctaag
gatttagcttatgttcgtattgaccgtactcgtaagcttccattaacagttctaattcgt
gctttaggatttggatctgatagtgaagttgctgatatgtttggtgaaagtgactcactt
cgtttcactttagaaaaagatatccacaaaaatcctgctgactctcgtgttgccgaagcc
ttaaaggatatctacgaaagattacgtccaggtgaacctaagacaactgattcatctcgt
tcgcttttgtatgctagattttttgatccaagaagatacgatttagctcctgttggtcgc
tacaagatcaataagaaactttctttaaagaatcggttattaagacaaactttggctgaa
actttagctgaccctgatactggtgaaatcattgctaaaaagggtgacgttgttactcat
gaaattcttgataaattgtcaccttacttagatcgtgacgactttaagatggtaacttat
gaaccttcaaaggaaggtgtcttacctgacccagtaacagttcaagaaattaaagtatat
tctaaggttgatcctgaacgtgtaattaagttaatgtctaacggtcatattgctgatgac
gttaagcacttaactccagctgatgttttggcatcaattaactacttctttaaccttcaa
gataacatcggaactactgatgatatcgaccacttaggtaaccgtcgtattcgtcgtgta
ggtgaattacttcaaaaccaatttagaattggtttagcaagaatggaacgtgttgtgcgt
gaaagaatgtcaattcaagatatttctacagttacaccacaacaattaattaacattcgt
cctgttgttgcttcagttaaggaattctttggttcatcacaattgtcacagttcatggac
caaaacaacccacttggtgagttaactcacaaacgtcgtatgtctgccttaggacctggt
ggtttgtctcgtgaccgtgctgggtacgaagttcgtgacgtgcactatactcactatggt
cgtttatgtcctattgaaactcctgaaggacctaacattggtttgattaactctttagca
acttacgctattgttaataagtatggctttattgaaacaccataccgtcgtgtttcttgg
gatactcacaaggttactgacaagattgattacttaactgctgatgttgaagataattac
attattgctggtgccaacgctccattaaatgaagacggttctttcaaggataagatcgtt
ttagctcgtcataaggaagataaccttgaagttactcctgataagattgactatatggac
gttattcctaagcaagtagtttcagtaacttctgcatgtattcctttccttgaaaacgat
gactctaaccgtgccttgatgggtgctaaccaccaacgtcaggctgttccattgattaac
ccacatgctccaattgttggtactggtatggaataccgtgctgctcatgactctggagat
gcattagttgctaaagcacctggtgtagttgaatacgttgatgcaaacgaaattagaatt
agaagagacgacgatactttagataagtatgttcttgaaaaattccgtcgatcaaatgca
actaagaactacaaccaaacaccagctgttaagcaaggcgaaagagtagtagctgacgaa
gttattgccgatggtccagcaatggaaaacggtgaattagctctaggtcaaaacccaatt
attgctttcttgacttggaacatgtacaactatgaagatgccgttatgatttctgaacgt
atggttaaagatgatgtctacacatctatccatattgaagactatgaatcagaagctcgt
gatactaagcttggacctgaagaaattacacgtgaaattccaaacgttggtgaagatgcg
cttaaagacctcgatgaagaaggtattgtacgtattggtgccgaagttcaagacggtgat
atcttagttggtaaagttactccaaagggtgtgactgaattatcagctgaagaacgtttg
cttcacgctatctttggtgaaaaggctcgtgaagttcgtgacacttccttacgtgtacca
catggtggtggcggtattgttcaaaacgtacaagtcttcacgcgtgaagcaggagacgaa
ttgccacctggtgtaaacaagatggttcgtgtctacatcgttcaaaagcgtaaaattcaa
gttggtgacaagatgtctggtcgtcacggaaacaagggtactattgccttagtttgtcct
gaagaagatatgccatacttgccagatggtcgtccagtagacatttgtttgaatccaatg
ggtgtgccttcacgtatgaacattggacaggttcttgaattacatttaggtattgcagct
aagcaattaggtattcatgttgccactccagtatttgatggtgcttctgaagatgatatg
tggaacatggttcgtgaagctggtattggtaaagacggtaagactgttctttacgatgga
cgtactggtgaaccattccataaccgtgtttcagtaggtattatgtactacttgaagttg
actcacatggttgatgataagatccacgcacgttcaattgggccttactcacttgttact
caacaaccacttggtggtaaagcacaatttggtggtcagcgtttcggtgaaatggaagtt
tgggctcttgaagcttacggtgctgcatacacattgcaagaaatcttgacttacaagtca
gatgatgttgttggtcgtgttaaggcatatgaagctattgtcaagggtgaaagaattcca
aaaccaggtgttccagaatcatttagagttcttgttaaggaacttcaatccttaggtttg
gatattaaagtcttagatatggatcacaaggaaattgaattacgtgatatggacgatgat
tctaatgatcacttcaacattgacactttatctaagcttgctgaacaacaagaaaagaag
aagttggccgaagaagctgcaaagaaagatgacaagtcagctgaacctgtagatcagagt
gattcttcaacttcatctgatgataaggtttctaagtaa
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integrated database retrieval system
