Lactobacillus gasseri ATCC 33323: LGAS_0816
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Entry
LGAS_0816 CDS
T00410
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lga
Lactobacillus gasseri ATCC 33323
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lga03016
]
LGAS_0816
Enzymes [BR:
lga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LGAS_0816
Transfer RNA biogenesis [BR:
lga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LGAS_0816
Prokaryotic type
LGAS_0816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ABJ60207
UniProt:
Q044B5
LinkDB
All DBs
Position
798733..799626
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AA seq
297 aa
AA seq
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MLNGIVVVNKPRGVTSSDCVYKLRKILQIRKIGHAGTLDPEVNGVLPIAIGQATKLIELM
HEKPKSYIGSGMFGRATDSYDLDGKTIAEEKINTPFTSNEIIAGMEKLTGKLEQVPPIYS
AVRVNGKRLYEYARENIPVERPKRKVNVYSYELTQDPEYDPLEKTESFNFAIRCSKGTYV
RSLVNDLGEELGVPAVMTSLTRTSSSGYDLNQAVDLETIEAEIDTPGKWLQPIDSFFAEL
PQLQLSPDQFKRVSNGASISLNTSYAKVALVYNGHIKAIYRRQGKIYRPEMMLLKNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatggaattgtagtagtaaataagccacgtggagtaacaagcagtgattgtgtt
tataaattaagaaagatacttcaaattagaaaaatcggacatgctgggacgcttgatcct
gaagttaatggcgtattaccaattgctattggtcaagcgacgaaattgattgaattaatg
catgaaaaacctaaatcctatattggaagcggaatgtttgggcgagctactgatagttat
gatttagatggtaaaactattgctgaagaaaaaataaatactccgtttacaagtaatgaa
attattgctggcatggaaaagttgacaggaaagcttgagcaagtaccgccaatttattca
gctgtaagagtaaatggtaaaaggctttatgaatatgctcgggaaaatattccagttgaa
cgtcccaagcgaaaagtcaatgtttatagctatgaattaacacaagatccagaatatgat
ccattggaaaaaacagaaagctttaattttgcaattcgctgttctaaaggaacctatgtc
aggtcattagtaaatgatttaggtgaagaattaggtgtacctgctgtaatgactagtctt
acgcgaactagtagttcaggctatgacttaaatcaagctgtagatttagaaacaattgaa
gcagaaatagatactccaggaaaatggcttcagccaattgatagcttttttgctgaatta
cctcaacttcaactttcgccagatcaatttaaacgggtttcaaacggtgcaagcattagt
ttaaataccagttatgctaaggtcgctttggtttataatggtcatataaaagctatttat
cggcgacaaggaaaaatctatcgccctgagatgatgcttttaaaaaatgaatag
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