Lactobacillus gasseri ATCC 33323: LGAS_0874
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Entry
LGAS_0874 CDS
T00410
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lga
Lactobacillus gasseri ATCC 33323
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lga03016
]
LGAS_0874
Enzymes [BR:
lga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LGAS_0874
Transfer RNA biogenesis [BR:
lga03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LGAS_0874
Prokaryotic type
LGAS_0874
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
ABJ60263
UniProt:
Q043V9
LinkDB
All DBs
Position
865897..866826
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AA seq
309 aa
AA seq
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MEIQFLGTSAGQPSKSRNVSCTALKLLDELNEVWLFDVGEATQHQILKTNIRPRKVTRIF
ISHTHGDHIFGLPGFLSSRSFQGDGGPLTIYGPAGIEQFVQTSLKVSRTRVSYPIKYVVL
KEDGLIFENNLFAVYTARLDHRVPSFGFRVVEKPRPGELLMDKVAEYNVPNGPLLGQLKA
GKTITLSDGQKLDGRDFLGKERPGRVVTIIYDTRPTENIGKLADHADVLVHESTFNGDEE
KMAHRYFHSTCLDAARIARDRHVRKLYLTHISARYTGKAGKELEHEARKIFKHTRLANDL
DSFEITLRG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacaatttttaggaacaagtgctgggcagccgtcaaaaagcagaaacgtttct
tgtaccgcacttaaattattagatgaattaaatgaagtatggttatttgatgtaggtgaa
gctacacagcatcaaattttaaaaactaacattagacctagaaaggtaacgcgaattttt
atttcgcatactcatggcgatcatatttttggtttgccaggttttctttcatctcgttcc
tttcaaggcgacggtggtccattgacaatttatggacctgctggaattgaacaatttgtg
caaacttctttgaaagtttcaagaactcgcgtatcatatccaattaaatacgttgttttg
aaagaagacggtttaatttttgaaaacaatcttttcgccgtttatactgcccgtttagat
caccgcgtaccaagttttggctttcgtgtggttgaaaagccacgtcctggtgaattattg
atggataaggttgcagaatataatgtgccaaatgggccacttcttggtcaattaaaagcc
gggaagacaattacattaagcgatggtcaaaaattagatgggcgagatttccttggcaaa
gagcgtccaggacgagttgttacaattatctatgatacacgtccaacagaaaacattggt
aagctagctgatcatgcagatgttttagttcatgaatctacttttaatggtgatgaagaa
aagatggcgcatcgctatttccattcaacttgcttagatgctgctcgtatagcaagagat
cgtcatgtacgaaagctttatttgacccatatttctgcgcgctacacgggaaaagcaggt
aaagaattagaacatgaagcgagaaagatctttaagcatactcgtttagctaatgattta
gatagttttgaaattacattgaggggataa
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