Lactobacillus gasseri ATCC 33323: LGAS_1031
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Entry
LGAS_1031 CDS
T00410
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) beta subunit
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lga
Lactobacillus gasseri ATCC 33323
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lga03400
]
LGAS_1031
Enzymes [BR:
lga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGAS_1031
DNA repair and recombination proteins [BR:
lga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LGAS_1031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
Viral_helicase1
Cellulase
AAA_12
CCDC28
AAA_30
AAA_14
AAA_16
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ABJ60406
UniProt:
Q043G6
LinkDB
All DBs
Position
complement(1034711..1038325)
Genome browser
AA seq
1204 aa
AA seq
DB search
MTNFTKEQDQAINDAGKDILVSASAGSGKTTVLVERVLKKILSGTPVSSLLIITFTKAAA
REMKERIKQKISDQLEIEPDNQFLRSQLLDVDTANISTIDSFCLDVIRRFYYVIDLDPQF
SVLTDETQAELLKERALREIEADYLEGDNQDFQDFYDNFSGDRDAEGARNLLLQLYNTAT
TEPNYEKFLDNLPTCYEVGDNLIRSNLWQQQIKPLLLKEISDLKAEVEALLAEPEINSSD
LVKVKENYDIFSNRLDSFWESLNTDQPYNEIRANLMNCKFEKAVRKSKKWSDESIEVYQD
SQDLKLDLNDQLKKIFASFFVVEEKEQIAVLQKSEKIVKTIVAAEKKLIQKFSQLKREQN
LIDYSDMEQFAFSILTTDTSNAHIAQEYYQEKFNEILIDEYQDVNALQENIIKAIKKKGQ
NTLFMVGDVKQSIYGFRQARPDLFLSKYHTYGKDNDSEKIILADNFRSTKRVTKTVNDLF
NPILTTNFGGIDYKKEGQLQFGASYYPSDLPTASEYIFTDKKQTQSAYEDQYGDEMDFSE
VQMVIARIKQLKAENFQVWDRRTQLKRPLEYSDIAIITRTRSDNLQVMQEFAKADLPLFV
TDAQNYFQTFELIMIMNYLRLIDNPQQDIPLVAVMRSPLFNFKEPELAQIRVKTPAGNFY
TALTSFASVNSSLGKKCKEFLQQLETLRSFAATHRISELIWSIYEKTHLLEIVTGLPNGQ
QRRVNLESLYERATSYESAGFKGLYQFISFIERMRKNQKDLAQPLLSDKADNAVKLMTIH
ASKGLEFPIVFVMGLGHQYQTRDLSGNFTISQNELGLTIKEKNYRIDSLVKSLADVQKRQ
QMLEEEARILYVGLTRAQQKLILVASVNEIENKRKKWVSELDQKKDIIPLVKKINAQSPL
DFLGPKLEQKHEFDQTIRDMTSALEEQDKLYYLKFNLDLEPEKIKDQNEDSQEVNSNVNK
VVKELYNFKYPFEDATKTTAYQSVSEIKKAFNDPIDTELENSRLISSSNRYLQPIDETPT
FLEGQKFTGAEIGTAMHLVLQYYNYEGNKDQENLDQEIDQLVELGKLNSLMVPHLSKEAL
NWFVMSDFAKEFWKQPDKLHRESQFSSLVNASELFNDFSDPSAKVLVHGTVDGYFEAKDG
LILFDYKTDFVDKTNEEQAIEKIKQKYTGQLRLYEQALNEMNNDKKVIGKYLILLDARKV
VPVD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaattttactaaagaacaagatcaggcaattaatgatgccggaaaagatatctta
gtttctgcatctgctggttcaggtaagactaccgttttagttgagcgagttttaaaaaag
attctgtcgggtacaccagtctcatctttactgattattactttcactaaggccgcagca
cgtgaaatgaaagaacgaatcaaacaaaagataagcgatcaacttgaaattgaacctgat
aatcaatttttacgtagtcaattattagatgtcgatacagctaatatttctacgattgac
tctttttgtttagatgtaattagacgtttttactatgtaattgaccttgatccgcaattt
agtgttttaactgatgaaactcaggcagaacttttgaaagagcgcgccttgcgtgagata
gaggcagattatcttgaaggagataatcaagactttcaagatttttatgataatttctca
ggggatcgggatgcagaaggcgctcgcaacttgctcttgcaactgtataatacagcaacg
accgaaccaaactatgagaagtttctcgataatctgccgacttgctatgaagtaggcgat
aatttaattcgatctaatttgtggcagcagcaaataaagcctcttttacttaaagaaata
tccgatttaaaagcagaagtagaagctctgcttgctgaaccagaaataaatagttctgat
ttagttaaagttaaagagaattatgacattttttctaatcgtttagatagcttttgggaa
tctttaaatactgaccaaccgtacaacgaaattcgtgctaatttaatgaattgtaaattt
gaaaaagcagtccgaaagtctaaaaaatggtcagatgaaagcattgaagtatatcaagat
agtcaagatttaaaattagacttgaacgatcaacttaaaaagatttttgctagctttttt
gtggttgaagaaaaagagcaaatagcagttttgcaaaagtcagaaaagatagttaaaaca
attgttgcagctgagaaaaaattgattcaaaaattcagtcaattaaaacgtgagcaaaat
ttgattgactatagcgatatggagcaatttgcttttagtattttgacgacagatacttca
aatgcacatattgcacaagaatattatcaagaaaaatttaacgagatcttgattgatgaa
tatcaagatgtgaacgcacttcaagaaaatatcattaaagccattaaaaagaaggggcag
aacacgctttttatggttggggatgtcaagcagtcaatttatggctttaggcaagcacgg
ccagacctctttttgagtaagtatcatacttatggtaaagataatgatagtgaaaaaatc
atcctagctgataattttagatcaaccaaaagggtcaccaaaacagttaatgacttattt
aatccaattttgacaactaattttggtggtattgattataaaaaagaaggccaattacag
ttcggagctagctattatccatcagatttgccgacagcaagtgaatatatttttaccgat
aaaaaacaaacccagtcggcttatgaagatcaatatggcgatgaaatggattttagcgaa
gttcagatggtaattgcgagaattaagcaattaaaagcagaaaattttcaagtttgggat
cgcagaacgcagcttaaaaggccacttgagtattcagatattgcaattattacaagaact
agaagtgataacttgcaggtaatgcaagaatttgccaaagctgatttacctttatttgtt
actgatgcgcaaaattattttcaaacttttgagttgattatgattatgaattacttaagg
ttgattgataaccctcagcaagatattcctctagtagctgtaatgagatcacccctattt
aacttcaaagaaccagaacttgcacaaattcgcgttaaaactccagctggcaatttttat
actgcgcttactagctttgcatcagttaattcgtctctaggaaagaaatgtaaagaattt
ttacagcagcttgaaactcttcgctcatttgctgctacgcaccgaatttctgagttgatc
tggagtatttacgaaaaaacacatcttttagaaattgtcactggtttaccaaatgggcaa
caacgtagagttaatcttgaatctttgtatgaacgggcaacttcgtatgaaagtgcaggt
tttaaaggcttgtatcaattcattagttttattgagcgaatgagaaagaatcaaaaagat
ttagctcaacctctcttaagcgataaagcagataatgcagtgaaattaatgactattcat
gcttctaagggactagagtttcccatagtatttgtaatgggattaggacatcagtatcag
actagagacttaagtggaaatttcacaattagtcagaatgaattaggtttaacgataaaa
gaaaaaaattatcgtattgattctttagttaaatcattagctgatgttcaaaaaagacaa
caaatgcttgaagaagaagcaagaattttatatgttggcttaactagagcacagcagaaa
ttgatcttagtggcaagcgtgaacgaaattgaaaacaaacgaaaaaaatgggtgagtgag
cttgatcaaaagaaagatataattccattagttaaaaagattaatgctcaatcaccgctt
gattttttaggaccaaagctagagcaaaaacatgaatttgatcaaactattcgagatatg
acctctgctttagaagaacaagataagctctattatttaaaattcaatcttgacttggag
cctgagaaaattaaagatcaaaatgaggatagccaagaagtaaattctaacgtaaacaag
gtagttaaagaattgtacaactttaagtatccatttgaagatgctactaagactacagct
tatcagtctgtatctgaaattaaaaaagcctttaatgatccaatagatacagagcttgaa
aactctcgtcttatatcttcaagtaatcgttatttacaaccaattgatgaaacaccaacc
tttttagagggacaaaaatttactggtgctgaaatagggacggcaatgcacttagttttg
caatattataattatgaaggtaataaagaccaagaaaatttagatcaagaaatcgatcag
ctcgttgaattaggaaaactgaattctttaatggttccgcatttgtctaaagaagcttta
aattggtttgtaatgagtgattttgctaaagaattttggaagcaaccggataaattacat
agagaaagccaattttcaagtctcgttaatgctagtgaattatttaatgacttttctgat
ccatctgcgaaggttttagttcatggaacggtggatggatattttgaagcaaaagatggt
cttattttattcgattacaaaactgattttgtcgataaaacaaacgaagaacaagcaatt
gaaaaaattaagcaaaaatataccggacagctacggctatatgaacaagctctaaatgaa
atgaataatgataagaaggttattggaaaatatttgattttgcttgacgcaaggaaagtg
gtcccagtagactag
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integrated database retrieval system
