Lactobacillus gasseri ATCC 33323: LGAS_1032
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Entry
LGAS_1032 CDS
T00410
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lga
Lactobacillus gasseri ATCC 33323
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lga03400
]
LGAS_1032
Enzymes [BR:
lga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGAS_1032
DNA repair and recombination proteins [BR:
lga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LGAS_1032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
ABJ60407
UniProt:
Q043G5
LinkDB
All DBs
Position
complement(1038326..1041802)
Genome browser
AA seq
1158 aa
AA seq
DB search
MINVITGRQVDNLQNEIIDQAVKSYYQDKTHDVFIIVPNHIKFTTEVRALSKLSVLTNKK
QVAVNKLHILSFSRLAWYFLKDEAIKLPQILDDAASVMLLEQIVKDHQDELKLFQNKNQI
TSGALRQMYEAILSVRAGNIDLENIDNEKLNEETSYKVHDLQIIYDDFIDRLSEKFATKD
EMQLLLNEFLAKSDSLSTMVFYFSDFSHFSLQELTSVRLISKKAKNTTLAFKTKIGKIDS
KAEQGDYDYVVQRTIRQLEHFWQNQQLNYQTTEFPLTKTNPSSLLNGVWTKTNGFDESLS
KFLQPVKADSRYAEAYFVARTIYQQVALNNYRYQDFLVLAPNLNEYETYLTPILRQNNIP
FFNDLQKEMKYHPLVVAVENLQQIFKRGFQTDNVIALMKTQLFIPEWYKSVARYQNDVDL
LENFVLAHGIKGELWKKPLKSFVDAEVIALDKSEQEVEELDRLRKYFISILSEFFEDIET
EKDPQAGVTIFWNFLIKNRVAKRLEAWRKEANDAGDLQLAQQPEQVWSTLNDLLKDYLLV
AKEFSLEQFFDLLISGFSEANFSQIPSTLDAVNISEMGMVQGQGYKQVFIIGATSSNLPQ
IEKIPGFFSSENLEQLNDGNNASGYLEDQQKINNLDQNYQFGNALSLASDKIYISYPVIN
TANEQLEPSIFYKQLLRLTQANEFSQHDLPSSAGDLLTFMTNPEASLGYLTYLKGKQEVN
VDSILELTEQEIGEVAQNVLEGSNFKNVPENLPPKLAQELYGDRIETSVSQLETYYQNSF
EYFLNYGLHLKKRFENELDVIQAGNYYHETFDYLVKKIKEKNLDFADLTDSKLNQLLIEV
REELKEKGRYRQLLNDPFNKYLFHKLDQTTSNVAHYWHSNVNKTTFRPQYSELSFGKNQK
VTGLSYSWKDENNQKKIVDLRGKMDRVDLAKVNDRVLGEVIDYKSSAKKFDLGLFANGIS
MQMISYLEVLKKNNKFFAQGKNLDVLGAFYQNITSSLERLSSDKMILSNYQIKDLLKEST
KKLMYNGILVADEEILDLIEPGMEKDRATSEIYSSIKRKVNGDISWPRNQSFTPDQLELL
LAYNSYLIKNAGSEILSGKIKLDPYTYGQQSSLTYSDFKDIFFFDAMLKENNYHKIKAID
KKTLLNLIKEKLDLDGDE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgtaattactggtagacaagtagacaacttgcaaaatgagattatcgatcaa
gctgttaagtcatattaccaagataaaacgcacgatgtttttattatcgtgccaaaccat
attaagtttaccacagaagtacgagcacttagcaagctctctgttttaacaaataaaaaa
caagtagcagttaataaactccatattctttctttttcaagactagcctggtattttttg
aaagatgaagcaatcaaattaccgcaaattctggatgatgccgctagtgtgatgctactt
gaacaaattgttaaggatcatcaggacgaattaaaactatttcaaaataaaaatcaaatt
acgtctggtgctttaaggcaaatgtatgaagcgattttatcggttcgggctggaaatatt
gacttagaaaacattgataatgaaaaattaaatgaagaaaccagctataaagtccatgat
ttgcaaattatctatgatgattttattgatcgtctatctgaaaaatttgcaactaaagat
gagatgcagctcttgcttaatgagtttttagctaaaagcgatagtttaagcacgatggta
ttttacttctccgatttttcgcatttttccttgcaagaattaacttcagtacgcttaatt
tcaaaaaaagctaagaatacgactttggcgtttaagacaaaaattggcaaaatagatagt
aaagcggaacaaggagactatgattatgtggttcaaagaacaattagacaactagagcat
ttttggcaaaatcagcaattaaattatcaaactactgaatttccacttactaaaactaat
cctagctccctattaaatggagtttggaccaagacaaatggttttgatgaaagtttaagt
aagtttttgcagccagttaaagcagattctagatatgccgaagcatattttgttgcgcgg
acaatctaccagcaagttgctttaaacaattatcgttatcaagactttttagttttagcg
ccaaatctaaatgaatatgaaacttacttaacgccaattttgcgtcaaaataatattcct
ttcttcaatgacctgcaaaaagagatgaagtatcatcccttagtcgttgcggtagaaaat
ctccagcaaatttttaagcggggttttcaaacagataatgtaattgctctaatgaaaacg
cagctttttattcccgaatggtataaaagcgtagcgcgttatcaaaatgatgtagattta
cttgaaaactttgtgttggcacatggtattaagggagaactttggaaaaaacctttaaaa
agttttgtggatgcggaagtaattgcacttgataagtcagagcaagaggtagaagaactt
gaccgtttgcgtaaatactttattagtattctaagtgaattttttgaagatatagaaaca
gaaaaagatccgcaagctggagtgacgattttttggaacttcttaattaaaaatcgagtt
gcaaaaagactagaggcttggcgaaaggaagcaaatgatgctggcgacttacagttagcg
cagcaacctgaacaagtttggtcaaccttaaacgatttgttaaaggactacttattagta
gctaaggaattttctttagaacaattttttgatctcttaattagcggatttagtgaggct
aatttttcacaaattccatctactcttgatgcagttaatatctctgaaatgggaatggtt
caaggacaaggttataagcaagtatttattattggggcaacaagtagtaatttgccgcag
attgaaaaaattccaggtttctttagttcagaaaacttagaacaactaaatgatggaaat
aatgctagtggctatttagaagatcagcaaaaaattaataatctagatcagaattatcaa
tttggtaatgcactaagtttagctagtgataagatttatatttcttatcctgtaattaat
acggcaaatgaacaattagaaccatctatcttttataaacaacttctcaggttaactcag
gcaaatgaattttcacagcatgatttacctagttctgctggcgatcttttaacttttatg
actaatccggaagctagtctaggttacttaacttatttaaagggcaaacaagaagttaat
gtagattctatcttggagttgactgagcaagaaataggcgaagtagctcaaaatgtgctt
gaaggaagtaattttaagaatgttcctgagaatctccctcccaaattggcccaagaacta
tacggagatcggatagagacttcagtttcacaacttgagacctattaccagaattctttt
gaatatttcttaaattatgggcttcatttaaagaagaggtttgaaaatgagcttgatgta
attcaagcaggtaattattatcacgaaacgtttgactatttagttaaaaaaattaaggaa
aaaaacttggattttgctgatttaactgacagtaagttaaatcagctactaattgaagta
cgagaagaattaaaagaaaaggggagatatcgtcagcttttaaacgatccattcaataaa
tatttgttccataagctagaccaaactacatctaatgttgcccattattggcatagtaat
gtaaataaaacaacttttagaccacaatattcggaattaagtttcggcaaaaatcaaaaa
gtgacagggctatcttatagctggaaagatgaaaataatcaaaagaagattgttgatcta
cgaggaaaaatggatcgagttgatctggctaaggtgaatgatcgagttttaggagaggta
attgactataagtcttctgcgaagaaatttgacttaggcctctttgccaatgggatttca
atgcagatgatttcttatttggaagtcttaaaaaagaataataagttttttgctcaaggt
aaaaacttagatgttttaggagctttttatcaaaatattactagcagcttggaacgctta
agtagtgataagatgattctaagtaactatcaaattaaggatcttctcaaagaaagcaca
aagaagctaatgtataacggaattttagttgccgatgaagagattctggacctaattgaa
ccaggaatggagaaagatcgagctacttcggaaatatatagcagcattaaaagaaaggtt
aatggtgatattagctggccacgaaatcagagctttacccctgatcaactagaattgctg
ttagcatataactcttacttaatcaagaatgctggaagtgaaatcttatcaggtaagatt
aaacttgatccatatacttatggacaacaaagttccttaacttattctgactttaaagat
attttcttctttgatgctatgttaaaagaaaataattaccataagattaaagcaattgat
aagaagacgcttttaaacttaattaaagaaaaactggatttggatggtgacgaatag
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