Lactobacillus gasseri ATCC 33323: LGAS_1421
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Entry
LGAS_1421 CDS
T00410
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lga
Lactobacillus gasseri ATCC 33323
Pathway
lga03030
DNA replication
lga03410
Base excision repair
lga03420
Nucleotide excision repair
lga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGAS_1421
03410 Base excision repair
LGAS_1421
03420 Nucleotide excision repair
LGAS_1421
03440 Homologous recombination
LGAS_1421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lga03032
]
LGAS_1421
03400 DNA repair and recombination proteins [BR:
lga03400
]
LGAS_1421
Enzymes [BR:
lga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGAS_1421
DNA replication proteins [BR:
lga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LGAS_1421
DNA repair and recombination proteins [BR:
lga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LGAS_1421
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGAS_1421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Polysacc_deac_2
HHH_2
HHH_5
Imm9
DUF61
Motif
Other DBs
NCBI-ProteinID:
ABJ60782
UniProt:
A0A805YV49
LinkDB
All DBs
Position
complement(1412802..1415492)
Genome browser
AA seq
896 aa
AA seq
DB search
MTVFLFKEKKMAQKKLLLIDGNSVAFRAFYALYRQLDRFTSPDGLHTNAIFTFKNMLDAI
MKQTDPSNVLVAFDAGKVTFRTKMYQDYKGGRQKTPSELSEQLPVIREMLKDLGIKSYEL
KNYEADDIIGTLSKMGEEAGYTVDIVTGDRDLTQLASDKTTVLITKNGVGDTEAYTPEHM
KEVNGVTPTEFIDMKALMGDNSDNYPGVTKVGPKTASRLIQKYGSVEKLYEHVDEMKKSK
LKENLINDKDKAILAKKLATIDRDSPVEVTLADTKLEEPNIEDLRNLYERLGFKKFLAEL
GASGVSAGKQESEKYEYLELTRENIADLDKINEKEVTFYLAMLGDNYHLAPLEGFSLKVS
DKIYVSKDVVLLQEAPLRQMLEDKKIKKNVFDIKRTYVGLHRLDIDAEGLDYDMLLASYL
VNNENNSNDLGEVAHLYDDYSVKTDLEVYGKGKKQAVPEDDEFFEHLAAKVAVIEKLKQP
LLEKLKDHEQDDLYETIEIPVAFVLAKMEITGIKVEASVLNQLGNDFAVKLQELEHKIYQ
QAGEEFNLNSPKQLGHILFEKLNLPPIKKTKTGYSTSVEVLEQLKMKSPIVSEILDYRQI
AKIQNTYVKGLLECIQPDSRIHTRYLQTLTATGRLSSVDPNLQNIPTRTDEGKQIRKAFV
PSTKDGYIFSCDYSQVELRVLAHVSGDEHMQEAFKSGYDIHAHTAMKIFHLDSPDEVTPL
MRRHAKAVNFGIVYGISDYGLSKNLGISRKQAKTFIDNYFEQYPQIKDYMDKAIKKAREN
GYAETIMHRRRYLPDIHSKNFNVRSFAERTAINSPIQGSAADIIKIAMINMQKKLDELHL
KTKMVLQVHDELIFDVPKDELDTIKKIVPEVMQSAVKLDVPLIADSNWGHNWYDAK
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
ttgacagtttttttatttaaggagaaaaagatggcacaaaagaaattacttttaattgac
ggtaactctgtggcctttcgtgccttttatgctttataccgtcagcttgatcgctttact
agtccagatgggttacatacaaatgcaatttttacttttaagaatatgcttgatgcgatt
atgaagcagactgatccaagcaatgtattagttgcgtttgatgcaggaaaagtaactttt
agaactaagatgtatcaggattataaaggcggtcgacaaaaaactccaagtgaattatca
gaacaattgcctgtaattcgtgaaatgcttaaagatttaggaataaagagctatgagcta
aaaaattatgaagcagacgatattattggcacactttctaaaatgggggaagaagcaggc
tacactgttgatattgtaactggggatcgtgatttaactcagcttgcttctgataaaacc
acggttttaataactaaaaatggagttggtgatactgaagcatatacgccagaacatatg
aaagaagttaatggcgtaacgccaactgaatttattgatatgaaagcgctgatgggagac
aattcagataactatccaggtgtaactaaagttggtccgaaaacagcttcacgtttaatt
caaaaatatggctctgttgaaaaactttatgaacatgtggatgaaatgaaaaaatccaag
ttaaaagagaacctaattaatgataaagataaggcaattttagctaaaaagttagcaaca
attgatcgtgattctccagtagaagtgacacttgctgatactaagctagaagagcctaat
attgaggacttacgtaatttatatgaaagattaggatttaaaaaattcttagctgagtta
ggtgcaagtggagtgagtgccggtaagcaagaaagtgagaagtacgagtatctagaatta
acaagagaaaatatcgctgacttagataaaattaatgaaaaagaagtgacattttatctg
gcaatgttgggtgataactaccatctagctccgcttgaaggattttcactaaaggttagt
gataaaatctatgtttctaaagatgtagtcttactgcaagaagctccacttcgtcaaatg
ctagaagataagaagattaagaaaaatgttttcgacattaaaagaacctatgtaggttta
catcgactagatattgatgcagaaggtctagattatgacatgctcctggcttcttattta
gttaataatgaaaataattcgaatgatcttggcgaagtagcgcatttgtatgatgattat
tcagtaaaaactgacttggaagtttatggtaaaggtaaaaagcaagctgtacctgaagat
gatgagttctttgaacatttagcagctaaagttgctgtaattgagaagttaaagcagcca
cttttagagaaattaaaagatcacgagcaagatgacttgtatgaaacaattgaaattcca
gttgcttttgtcttagctaaaatggaaattactgggattaaggttgaagcatcggtttta
aatcaattaggcaatgattttgcagttaaattacaagaattagaacataagatttatcaa
caagccggcgaagaatttaatttaaattcaccaaaacagttaggacatattcttttcgaa
aaattaaacttaccgccaattaaaaagaccaaaactggctattcaacttctgttgaagta
ttagagcaattgaagatgaagagcccgattgtttcagaaattttggattatcgtcaaatt
gctaaaattcaaaatacttatgttaaaggattacttgagtgtattcagcctgatagcaga
atccatacccgttatttacaaacattaactgcaacggggcgtctttcatcggttgatcct
aatttacaaaatattccaactagaactgatgagggaaaacagattagaaaagctttcgtg
ccttcaactaaagacggctatatcttttcttgtgactactcacaagttgaattaagagtt
ttggcacacgtttctggggatgaacatatgcaggaagcatttaagtctggttatgatatt
cacgctcacactgcaatgaagattttccatttggattcacctgatgaagtaacgccatta
atgcgtcggcatgctaaggcagtcaacttcggaatagtttacggtatttctgattatggt
ttgtctaagaacttaggcattagtcgtaagcaagcaaagacatttattgataattacttt
gagcaatatccgcaaattaaagattatatggataaggcaattaagaaagctcgagaaaac
ggctatgcagaaactattatgcatagaagacgctacttgccagatattcattcaaagaac
tttaatgttagaagctttgcggaaagaactgcaattaattctcctattcaaggttcagct
gctgatattattaagattgctatgattaatatgcaaaagaaacttgatgaattacattta
aagactaaaatggttctacaagtacacgatgaacttatttttgatgtaccaaaggatgaa
ttagatacaattaaaaagattgtgccagaagttatgcagtcagctgtaaaactagatgtt
ccactaattgctgactctaactggggccataattggtatgatgctaagtaa
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