Lactobacillus gasseri ATCC 33323: LGAS_1493
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Entry
LGAS_1493 CDS
T00410
Name
(GenBank) tRNA (uracil-5-)-methyltransferase related enzyme
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lga
Lactobacillus gasseri ATCC 33323
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lga03009
]
LGAS_1493
Enzymes [BR:
lga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LGAS_1493
Ribosome biogenesis [BR:
lga03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LGAS_1493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
Methyltransf_31
Methyltransf_15
RrnaAD
TRM5-TYW2_MTfase
MTS
DOT1
PrmA
HMA
Motif
Other DBs
NCBI-ProteinID:
ABJ60849
UniProt:
A0A805Z9P1
LinkDB
All DBs
Position
complement(1485212..1486564)
Genome browser
AA seq
450 aa
AA seq
DB search
MQKNQIVDLEITDLSYEAMGVAHLDGMTVFVNNALPGEVVSAKILKVKKNFAFAKIEKIK
KESPDRINVERRQWVQTGLASLAHIKYDKQLEFKRNQVVNLLHKADLDNIKVSQTLPSPE
ETGYRNKAQVPVREVHGKLDIGFFRKHSHDLVPLTNFFTTDPEIDRVLIKVRDILRKNHV
PAYDEIHNKGEVRYLDVRRSKASGEIMVILVCLHKEFPQLKKVTKEISEIKGVTSVVLNH
NPKKTNVILGKKDYLLWGEPQITDKIGDVSFKISPQSFFQINSLQTPRLYDLAIQKADLK
PDDVVIDAYSGIGTIGLSVAKHVKAVRGMEVIKPAVDDANANAKLNGINNAEYVVGKAEE
VMPRWAKEGLKTDVIFVDPPRKGLTPEFIDAAVETHPKKIVYISCNPATMVRDLQLFREQ
GYDFNEIDPVDMFPQTPHVESVTVLERTGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaatcaaattgtcgatttagaaattaccgacctatcttatgaagcaatggga
gttgctcacttagacggcatgactgtctttgtgaacaatgctcttccaggtgaggttgtt
tcagctaaaattttaaaggtaaagaagaattttgccttcgctaaaattgagaaaattaag
aaggaaagtccagatagaattaacgttgaacgtcgtcaatgggttcaaacaggcttagct
tcgcttgctcatattaagtatgataagcaacttgagtttaaacgcaatcaagtggtgaac
ctattgcacaaggccgatttagataatattaaagttagtcagactttgcctagtccagaa
gaaaccggctatcgtaataaggcacaagtgccagttcgtgaggttcacggcaagcttgat
ataggtttctttagaaagcattcgcatgatttagtgccgttaactaatttctttactact
gatccggagattgaccgagttttaattaaagttcgtgatattttaagaaagaatcatgtt
ccagcttatgatgagattcacaataagggtgaagtgcgttatcttgatgtacgtcgctca
aaggcaagcggcgagattatggtaattttggtctgcttgcacaaggagtttccacagtta
aagaaggtaactaaggaaattagtgagatcaaaggtgtcactagcgtcgttttgaaccat
aatcctaaaaagactaacgtaattttgggtaaaaaagattatttgctttggggagagcct
caaattaccgataaaattggggatgttagttttaagatttcaccacaaagtttcttccaa
attaattcgctgcaaaccccgcgcttgtatgacttggcaattcaaaaagctgatcttaaa
cccgatgacgttgtaattgatgcctattctggaattggaacaattggtttgtcagttgct
aagcatgtgaaggcagtgcgagggatggaagttatcaagccagctgttgacgatgctaac
gcaaatgcaaaattaaatggtattaacaacgctgaatatgttgttggtaaagcagaagaa
gtaatgccgcgttgggctaaagaggggcttaagactgatgttatcttcgttgatccacca
agaaagggattaacgccagaatttattgatgcggctgttgaaactcatcctaagaagatt
gtttatatttcatgtaacccagctacaatggttagagatctgcaattgttccgtgagcaa
ggttatgactttaatgagattgatcctgtcgatatgttccctcaaactccccatgtggag
tctgttacggtccttgaacgtacaggaaaatag
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