Lactobacillus gasseri ATCC 33323: LGAS_1516
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Entry
LGAS_1516 CDS
T00410
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lga
Lactobacillus gasseri ATCC 33323
Pathway
lga03420
Nucleotide excision repair
lga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGAS_1516
03430 Mismatch repair
LGAS_1516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lga03400
]
LGAS_1516
Enzymes [BR:
lga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGAS_1516
DNA repair and recombination proteins [BR:
lga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGAS_1516
MMR (mismatch excision repair)
Other MMR factors
LGAS_1516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
YMR265C_C
Motif
Other DBs
NCBI-ProteinID:
ABJ60871
UniProt:
A0A806A835
LinkDB
All DBs
Position
complement(1508710..1510983)
Genome browser
AA seq
757 aa
AA seq
DB search
MFRLSGKREAMSEETILAELNPQQKKAVQCTEGPLLVVAGAGSGKTSVLTRRIAYLIEEK
GVAPWNVLAITFTNKAATEMKERVQKLLGPAADSVWMSTFHALCVRILRRDAEKIGYSNN
FSIADSAEQLTLIKRIEKDLNINPKMYDPKAILGAISNGKNDLLTPKDFKAQATSPFEKV
TAQVYAEYQHRLKRDQIMDFDDLIMQTLVLFKKDKETLHYYQNKFRYILVDEYQDTNEAQ
YQLCVALAAQYKNICVVGDADQSIYGWRGANMENILNFEHDYQDDEVNTIKLEQNYRSTG
HILDAANSVIKNNQNRKPKKLWTDKGDGDKINYYRAQSGNDEALFIVSKINEEIKEHHRD
YKDFAVLYRTNAQSRNVEEALVKSNIPYRIVGGHKFYDRKEIKDILAYLKVVANPADSMS
FNRIINVPKRGLGPTTMAKFNGFANDNDFTVEETFKNLSLAPITGRPAKTLATFGTALKD
AIEYSKTHSVTGLTEKLLADFGYKEALENEHTIEADTRLENLNEFLTVTKRFDDNYEPED
EDSTALGDFLSEISLLSDQDDLENQDNQVALMTLHAAKGLEFPVVFLVGMEEGLFPLSRA
TGDPSELEEERRLAYVGITRAEKKLYITNAFSRTMYGRPQNNQPSRFIDEIEDKDLEFVN
QVQSNSAMSIPFAKSSERATSQVYRPKTRIETAKKASGAVGADKKSWNVGDQVSHKAWGK
GVVVKVNGSGEDMELDIAFASQGVKRLLAAFAPIKKI
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaggttatcaggaaagagagaagcaatgagcgaagaaacaattcttgcagaatta
aatccgcagcaaaaaaaagctgtgcagtgtactgagggtccacttttagtagttgctgga
gctggtagtggaaaaacatcagttttaacacgtcgaattgcctatttaattgaagaaaaa
ggcgttgcgccatggaatgtcttagccattacttttaccaataaggctgcaactgaaatg
aaagaacgtgtccaaaaacttttagggccagctgctgatagtgtttggatgtcaactttt
cacgccttatgcgtgagaattttacgccgtgatgcagaaaagatcggttattctaataac
ttttcaattgctgattcggcggaacagttaactttaattaagcgaattgaaaaagatctt
aatattaatcctaaaatgtatgatcccaaagcaattttaggtgctatttctaatggtaaa
aatgacttgcttacacccaaagatttcaaagcgcaagcaactagtccctttgaaaaggta
acagcgcaagtttatgcggaatatcagcaccgcttaaagcgtgatcaaattatggatttt
gatgacttgattatgcaaacgctagtcttgtttaagaaagataaagaaacgcttcattat
taccaaaataagttccgctatattttagttgatgagtatcaggatacaaatgaagctcaa
tatcaactttgtgtggcactagctgctcagtataagaatatttgtgttgttggggatgcg
gaccagtcaatctatggttggcgcggagctaatatggaaaatattcttaattttgagcat
gactatcaagatgatgaagttaatacgattaaacttgaacaaaattatcgttcgactggt
catatcttagatgctgctaattcagttattaagaataatcaaaatcgtaagcctaaaaag
ctttggactgataagggcgatggtgataagatcaactattatcgtgctcaaagtggtaac
gatgaagcactctttattgtttcaaagatcaacgaagaaataaaagagcatcacagagac
tacaaggattttgcggttctttaccgcacaaatgctcaatctcgtaacgtcgaagaagct
ttagttaaatcaaacattccttaccgaattgttggcggtcataaattctatgatcgaaaa
gaaattaaagatatcttggcctatttaaaggttgtagcaaaccctgctgattcgatgagc
tttaatcgaattattaatgtgcctaagcgtggattagggccaacaacgatggctaaattt
aacggctttgctaatgataatgacttcacagttgaagaaacatttaagaatttaagttta
gcaccaattacaggtcgtccggctaagactttagcaacttttgggactgctttaaaggat
gcaattgaatacagtaagacgcatagcgtaactggtttaactgaaaaattactagctgac
tttggctataaagaagctttagagaatgaacatacaattgaagccgatactagattagaa
aacttgaacgaattcttaaccgttactaagcgttttgatgataattatgagccagaagat
gaagattcgactgccttaggcgattttctttcagaaatttcacttttaagcgatcaagat
gatttagaaaatcaagataatcaggtagctttaatgacgcttcatgcagctaaaggatta
gagtttccagttgtctttttggttggcatggaagaaggacttttcccgctttcaagagcg
acaggcgatccaagtgaacttgaagaagaacgtcgtttagcctatgtaggtattacccgt
gctgaaaagaaactttacatcacgaatgccttttctagaacgatgtacggccgtccgcaa
aataaccagccatctcgctttattgatgaaattgaagataaagatctagaatttgttaac
caagttcagtctaattctgcaatgtcgattccttttgctaaaagtagtgaacgtgcaact
tctcaagtttaccgtccaaaaactagaattgaaactgctaagaaggctagcggtgcagtt
ggtgcggacaagaagtcttggaatgttggcgatcaagtttctcataaggcctggggaaaa
ggcgttgtcgtcaaagttaacggcagcggagaagatatggaattagatattgcttttgct
agtcaaggagtaaagcgccttttagctgcctttgcaccaattaaaaagatataa
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