Lactobacillus gasseri ATCC 33323: LGAS_1621
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Entry
LGAS_1621 CDS
T00410
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lga
Lactobacillus gasseri ATCC 33323
Pathway
lga00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LGAS_1621
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lga01007
]
LGAS_1621
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lga03016
]
LGAS_1621
Enzymes [BR:
lga01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LGAS_1621
Amino acid related enzymes [BR:
lga01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LGAS_1621
Transfer RNA biogenesis [BR:
lga03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LGAS_1621
Prokaryotic type
LGAS_1621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Laminin_II
GAS
DUF4473
COG4_N
Motif
Other DBs
NCBI-ProteinID:
ABJ60917
UniProt:
Q041F5
LinkDB
All DBs
Position
complement(1582064..1583374)
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AA seq
436 aa
AA seq
DB search
MLDIKVIRENLDWSKKKLATRGIKPEELDKLVAIDKERREALTKSEQLKQKRNEVSDQIA
QAKRNKEDASDAIKTMREVGKEIKDLDKEVEDLTQKQKYILLRLPNFPADSDPIGPDESY
NEEVRKWNEPTKFDFEPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVSNF
FLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKPRDLTLIPTAEV
PLVNYFRGKILDAKQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVDEDS
SWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREISSCS
NCTDFQARRSLIRYRDENGKLHLAHTLNGSGLAVGRTVAAILENYQNEDGTVNVPEALQP
YMHGMKVITKEPKFGE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgttagacataaaggtaattcgagagaatttagactggtcaaagaagaaattagctaca
cgtggaataaagccagaagaattagacaaattagtggctattgataaagaaagacgtgag
gctttaactaagagcgagcaattaaagcaaaagcgtaatgaagtatccgatcaaattgca
caagctaagcgtaataaagaagacgccagcgatgctattaagacaatgcgtgaagtcgga
aaagaaattaaggatttagataaagaagtagaagaccttactcaaaaacaaaagtatatt
ttacttcgtttacctaacttcccagcagattcagatcctattggaccagatgaaagctat
aacgaagaggttcgtaaatggaatgaaccaactaagtttgattttgaaccaaagcctcac
tgggaaattggtactgaattaaatattttagactgggatactgctgctaaggtttcaggc
gcccgttttgtttactataaaggtgctggtgccttacttgagcgtgcagtttcaaatttc
ttcttagatgaaaatactaaagatggttatactgaagtgatcccaccatacttggtaaat
gatgcttctatgcaaggaactggtcaattccctaaattcactgaagatgtttatacaatt
gttgataatgatgatcctgataagccacgtgatttaactttaattccaactgcagaagtt
ccattagttaactacttccgtggcaagattttagatgcaaagcaattaccaattaatgtt
actgcattctctccagcgtttagaagtgaagcgggatctgcaggacgtgacactcgtgga
ttgattagaatgcacgaatttagaaaagttgaaatggtaaaaattgttgatgaagacagt
tcatgggatgaattggaaaaattaacgcataatgctgaacatttacttcaaaagctcggc
ttaccatatcatgttgttgccctttcaactggggatgcaagttttactagtgctaaaact
tatgaccttgaagtatggatgccagctcaagataaatatcgtgaaatttcaagctgttca
aactgtacagatttccaagctcgtcgtagcttaattcgttatcgtgatgaaaatggtaag
cttcatttagctcatactttgaatggatcaggtctagctgtaggtagaactgtagcagct
attttagaaaattaccaaaatgaagatggaactgtaaacgtacccgaagcattacaacca
tacatgcatggtatgaaagtaattactaaagaaccaaaatttggtgaataa
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