Limosilactobacillus gastricus: LG045_01180
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Entry
LG045_01180 CDS
T07129
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
lgas
Limosilactobacillus gastricus
Brite
KEGG Orthology (KO) [BR:
lgas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgas03009
]
LG045_01180 (rnmV)
Enzymes [BR:
lgas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
LG045_01180 (rnmV)
Ribosome biogenesis [BR:
lgas03009
]
Prokaryotic type
rRNA processing factors
LG045_01180 (rnmV)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Slo-like_RCK
Motif
Other DBs
NCBI-ProteinID:
QGF39847
LinkDB
All DBs
Position
254477..255070
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AA seq
197 aa
AA seq
DB search
MDKIKEIIVVEGRDDTKRVHEALNADTFETNGSALSLDDLKRLEVLQAKRGLIVLTDPDF
NGERIRKMISHKIPEAKHAFISRQAGVPKNRSGSLGVEHASPQAIRQAIQVAHGSHSLDK
LLPTINQTDLMQAHLIAHPQAKQRRLQLGEVLGIGYVNGKQLLRRLQMFQITAEELRSAI
QQIDQKGSSYEENNRNW
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggataagattaaggaaatcattgtggttgaaggtcgcgatgataccaagcgagtccat
gaagccttaaatgcagacacgttcgaaacgaacgggtctgctttatcgttagatgattta
aagcgtttagaagttttgcaagctaaacgtggcctaattgtattaacagatcccgacttt
aatggagagcggattcggaagatgattagccataagattccggaagccaagcacgctttt
attagccgccaggcgggagtgcccaaaaatcgtagcgggagtttaggggtagagcatgct
agtccacaagcaattcggcaagcgatccaagtggcacatggtagtcatagtctagataag
ttgctacctacaattaaccagacagatcttatgcaagcccatttgatcgctcatccccaa
gccaagcaacgccgcctccaattgggtgaagtattagggatcggctatgtaaatggtaaa
cagttactgcgccgtctacagatgtttcagattacggctgaggaactaagatcggccatt
caacaaattgatcagaaaggttcatcatatgaagaaaacaaccgcaattggtaa
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