Limosilactobacillus gastricus: LG045_02200
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Entry
LG045_02200 CDS
T07129
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lgas
Limosilactobacillus gastricus
Pathway
lgas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lgas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LG045_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgas03021
]
LG045_02200
03400 DNA repair and recombination proteins [BR:
lgas03400
]
LG045_02200
Enzymes [BR:
lgas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LG045_02200
Transcription machinery [BR:
lgas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LG045_02200
DNA repair and recombination proteins [BR:
lgas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LG045_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
SAM_EPH
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
QGF40022
LinkDB
All DBs
Position
452253..453197
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPNIHKIEETDNFGKFVVEPLERGYGTTLGNSLRRVMLASLPGAAITSIQIDGVL
HEFSTVDGVTEDVTQIILNLKKVALRIDGDDAKDLEVDVKGPTEVTAADIQGYGDVSILN
PDLHLATVADGAELHIKMTADKGRGYSSADDNKSNMDMSAIGVLPIDSIYTPIDRVNYTV
ENTRVGQSNDYDKLTLDVWTNGSLTPTDAISLAAKILNDHLAMFVNLTEEAQTTQVMVER
EETHQEKVLDKTIEELDLSVRSYNCLKRADIQTVKDLTERTELDMMKVRNLGQKSLDEIK
LKLADLGVGFRQED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaattcgaaaaaccaaacattcacaaaatcgaagaaactgacaacttcggtaag
tttgtcgttgaaccattagaacgtggttacggaacgacattgggaaattcacttcgtcga
gtgatgttagcttcattaccgggtgcggcaattactagcattcaaattgatggtgtttta
catgaatttagtacggttgatggggtaacggaggatgttactcaaatcattttgaacctt
aagaaagtagctttaagaattgatggcgatgatgctaaagatcttgaagttgacgtaaag
ggtccaactgaagtgaccgctgctgatattcaaggctatggtgacgtttctatcttaaac
cctgaccttcacttagcaacagttgctgacggtgcagaattgcatattaagatgactgct
gacaagggtcgtggatattcatcagctgatgataacaagtctaacatggatatgagtgca
attggtgttttaccaattgactcaatttataccccaattgatcgtgtcaactatactgtt
gaaaacactcgggttgggcaaagcaatgattatgataaattgactttggacgtttggact
aatggttctttaaccccaactgacgctatcagtttagctgctaagattctaaatgatcat
ttagcaatgtttgttaacttaactgaagaagcccaaaccacccaagtgatggtagaacgt
gaagaaacgcatcaagaaaaggtacttgataagacaatcgaagaacttgatttatcggta
cgttcatacaactgtttgaagcgggctgatatccaaacggtaaaagacttaacggaacgg
actgaattagacatgatgaaagttcggaatcttggtcaaaagtccttggatgaaatcaag
ttgaagttagctgatcttggcgttggatttcgtcaagaagactaa
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