Limosilactobacillus gastricus: LG045_03600
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Entry
LG045_03600 CDS
T07129
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lgas
Limosilactobacillus gastricus
Pathway
lgas03030
DNA replication
lgas03430
Mismatch repair
lgas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG045_03600
03430 Mismatch repair
LG045_03600
03440 Homologous recombination
LG045_03600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgas03032
]
LG045_03600
03400 DNA repair and recombination proteins [BR:
lgas03400
]
LG045_03600
Enzymes [BR:
lgas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG045_03600
DNA replication proteins [BR:
lgas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LG045_03600
DNA repair and recombination proteins [BR:
lgas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LG045_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
RNase_T
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
tRNA_anti-codon
HHH_6
T2SSK
HHH_3
AAL_decarboxy
Phage_Cox
Rv2179c-like
Zn_ribbon_8
YhfH
PolyA_pol
Motif
Other DBs
NCBI-ProteinID:
QGF40255
LinkDB
All DBs
Position
717771..722105
Genome browser
AA seq
1444 aa
AA seq
DB search
MALSSKEQFNKLLQQINFTDPSLSNGELTQVTVHQKSRVWELYIHLDQVLPYPVFQQFYQ
AMVMSFQHLAQANVKIHIATETTSLDNQLVGAYWSGVIKMVAGDTGMARELSQTKEPQVV
DNQVQLTLENAKVAEFVQRRLLGLIETGYQEVGFPAFRIKTFVDEDASVAKREAIQAKQE
AAEQKLMAQAMQQIQQHKEQSQALEPVDGPVVIGKEINPKFELQRMRTIVEEERSVVVEG
YVFAKEIRELRSGRQLMVIEITDYTSSFAVKKFSRDKNDEAQFNALKEGMWVKVRGSVQE
DTYMNDLTINAYDINQVSHQERQDTAPEGEKRVELHLHSTMSTMDATNSVGDYVKQAIKW
GHPAIAITDHAGVQAYPEAFNTAYDGKKKQDKIKMLYGVEANVVDDGVPLVYNEDHTALA
GHVYVIFDVETTGLSAIYDRLIQVSAVKMQDGEVLDRFDEFIDPGFPLSAQTTELTSITN
EMVRGSKTEAEVLQLFRDFCGDAIIAGHNVSFDLGFMNTAYDRAHMSIISAPVIDTLPLA
RFLYPDLRGYRLNTLSKKFKIPLEHHHLASFDSEATGHLLHIFLKEAEERYQIQFVDDLN
KHMADNNAFRHARPFHVSIIAQTQAGLKNLYKLISMSNVDYFYRVPRIPRSVLNQYREGL
LLGSACANGEVFTAMMQKGYAEAKQKARYYDYLEVQPKPNYMPLIEQQMVADEGHLEDII
KNMVKLGQELDKPVVATGDAHYLNPEDAIYRKILISSQGGANQLNRTQRPEVPFRTTDEM
LALFDFLGEETAQQIVVTNTQAVAQMVDDGIHPVQDKLYPPNIPGANDELYNRTWETAKK
WYGENMPDFVKERIKIELDSIIGNGFAVIYLIAQRLVAKSNKDGYLVGSRGSVGSSVVAT
FTGITEVNPLPPHYRCPQCQHSEFFTKGEYSSGFDLPDKNCPECGTPMIGDGHDIPFQTF
LGFSGNKVPDIDLNFSGDYQPIAHNYMKVLFGENNVYRAGTIGTVADKTAYGYVKGYERD
HEIQFRKAEEDRLAKGATGVKRTTGQHPAGILIVPDDKEIYDFTPVQYPADDQSAAWETT
HFDFHSIHDNILKMDILGHDDPTMIRALQDLSGIDPQTIPMDDPGVMSLFSSPEQLGVTE
EQINSKTGTLGIPEFGTRFVRGMLEDTHPSNYSELLQISGLSHGTGVWLENAQELIQKGT
ATIANVIGCRDNIMTDLIHYGLDSETSFQVMEHVRKGKGIPDEWQEKMLEVGVPQWYLDS
CLKIKYMFPRAHAAAYVLMALRIAYFKTYFPLVYYAAFFSVRADDFDVVAMSRGKEAVKA
AMKEINDKGNDASAKEKGLLTILELANEMLERGFKFKMVDLERSDATDWLMDGDDTLIAP
FRAIPGLGINVAKQIVAAREEKEFLSKQDLKERGKVSNTLIEFMTENHVLDALPDENQLS
LFDF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggctttaagttcaaaagaacaatttaataaattacttcaacaaattaattttaccgat
ccatccttatcaaatggggaattaactcaagtaacggttcaccaaaaatctcgggtatgg
gaattatatattcatttagatcaggtgttgccatatccagttttccaacagttttatcag
gccatggtgatgagctttcaacatttggcgcaagccaatgttaaaattcacattgcgact
gagactaccagtttagataatcaactcgtgggcgcttattggtcaggggttattaaaatg
gttgctggcgatactggaatggctcgtgaattaagtcaaaccaaggaaccccaggtcgtt
gataatcaagttcaattaaccttagaaaatgcgaaagtcgcagaatttgttcaacggcgc
ttactaggcttaattgagaccggctaccaagaggtaggtttcccggcctttcgaattaaa
acctttgtggatgaagatgcgtctgttgctaaacgggaggctattcaggctaaacaagag
gcggcagaacaaaagttaatggctcaagccatgcaacaaatccaacaacataaggaacaa
agccaggcccttgagccggttgatggtcccgtggtaattggtaaggaaatcaatcctaaa
tttgagttgcaacggatgcggaccattgtggaagaagaacggagcgtagttgttgaaggc
tatgtctttgctaaagaaattcgcgaattacgttcgggtcgtcagttgatggtaattgag
attacggactatacttcctcttttgccgtgaagaaattttctcgtgataaaaatgatgaa
gctcaatttaatgccctgaaagaaggaatgtgggtcaaagttcgtggatcggtgcaagaa
gacacctacatgaatgaccttaccattaatgcttatgacattaatcaagtttcccaccaa
gaacgtcaagataccgctcccgaaggtgaaaaacgagttgagttgcatctacattcgacc
atgagtaccatggatgcgaccaattcggtcggagattacgttaaacaggcgattaagtgg
gggcacccggcgatcgctatcactgatcatgctggcgttcaagcttatccagaagctttt
aataccgcttatgatggtaagaagaaacaggataagattaagatgctctatggggtcgaa
gccaatgtggttgatgacggggtacctttagtttataacgaagaccataccgccttagct
ggtcacgtttacgtgatttttgacgtggaaaccacgggattgtcggcaatctatgatcgc
ttgattcaggtttcggcggtgaagatgcaagacggcgaagtccttgatcgttttgatgaa
ttcatcgatcccggttttcctttgtcagcccaaaccaccgaattaacaagtattaccaat
gaaatggtgcgaggatccaagacggaagcagaagtgctgcaattattccgggacttttgt
ggggacgcaattattgctggtcacaacgtttcttttgatttgggatttatgaatacggct
tatgaccgggctcacatgtccataatttctgcgccagtaattgatacattaccgttggcc
cgtttcttgtatccagatttgcgggggtatcgtttgaataccctaagtaagaagttcaaa
attcctttggaacaccatcacttggccagctttgattcggaagcaacgggtcatctgcta
catattttcttaaaagaagcagaagaacgctatcagattcaatttgtggatgacctaaac
aagcacatggcggataataatgcttttcggcatgctcgtcccttccacgtgtcgattatt
gcgcaaacccaagccggcttaaagaatctctataagttgatttcgatgtccaatgttgat
tacttctatcgggtcccacgaattccacggagtgttttaaatcaatatcgtgagggctta
ttgttaggaagcgcatgtgccaatggggaagtctttacggccatgatgcaaaagggttat
gccgaggcaaaacaaaaagcgcgttactacgactatttggaagttcaacctaaacccaat
tacatgcctttaattgaacaacagatggtggcggatgagggtcatcttgaagacatcatc
aagaatatggtgaagttgggtcaagaattggacaaaccagtagtggcgacgggtgatgcc
cattacttgaatccagaagatgctatctaccggaagattttaattagttcgcaaggggga
gctaaccaactgaaccggacccaacgtcctgaagtacccttccgaacgactgatgaaatg
ttagcgctctttgatttcttaggtgaggaaacggctcagcagattgtggttactaatacc
caagcagttgcccaaatggtagatgatgggatccatccagtgcaagataaactgtatcca
ccgaacattcccggggctaatgatgaactttataaccggacctgggaaacggccaaaaaa
tggtatggtgaaaacatgccggatttcgtcaaagagcggattaagattgaacttgatagt
atcattggcaatggatttgctgtaatctacttaattgctcaacggttagtagccaaatcc
aataaagatggttatttggttggttcgcggggatcggttggttctagtgtggtggcaacc
ttcactgggattactgaagtcaatccgttgcccccacattatcgttgtccgcagtgtcag
cacagcgagttcttcactaaaggggagtatagttcgggctttgatttacccgataagaac
tgtccagaatgtgggaccccgatgatcggtgacgggcacgatattcccttccaaaccttc
ttaggatttagtggtaataaggttcccgatatcgatttgaacttctcgggggactatcaa
ccaattgctcataattatatgaaagtgctctttggtgaaaacaatgtttaccgagccgga
acgattggtacggtggcggataagacggcctacggttacgtcaaaggctatgagcgcgat
catgaaattcaattccgtaaagccgaagaagatcggttagcgaaaggggcaacgggggtt
aaacgaaccactgggcaacacccggccggaattttgattgtgccggatgataaggaaatt
tatgattttacgcctgtccaatatccagcagatgaccaaagtgctgcttgggaaaccaca
cactttgatttccattcgattcacgataatattttgaaaatggatattttaggacatgat
gatcctacaatgattcgggccttacaagatttatcaggaattgatcctcaaacaataccg
atggatgatcctggggtgatgagtctcttctcaagtcctgagcaattgggcgtgaccgaa
gaacaaattaacagtaaaaccgggaccctgggaattcccgaatttgggacccggttcgtc
cgtggaatgttggaagatactcatccttcgaactattcggaattattacaaatttccggt
ttatcccacgggactggcgtgtggttggaaaatgcccaagaattaattcaaaaggggacg
gccacgattgctaatgtgattggatgtcgggataacattatgaccgacttaattcactat
ggtcttgattcggaaacatctttccaagtaatggaacatgtccgtaaaggaaagggaatt
ccagatgagtggcaagaaaaaatgctggaagttggcgttccccaatggtatcttgattca
tgtttaaagattaagtatatgttcccacgggcccatgcagctgcttatgtgttgatggct
ctgcgaattgcttactttaagacttatttcccactggtttactatgccgctttcttctcc
gttcgggcggatgactttgatgttgttgccatgtcgcgaggcaaagaagcggttaaagct
gccatgaaggaaattaatgataaggggaatgatgcctctgctaaggaaaaggggctctta
accatcctagaattagctaacgaaatgttggaacggggattcaagtttaagatggttgac
ctagaacgttcggatgccactgattggttaatggatggtgatgataccttgattgcgccg
tttagagccattcctggtttagggatcaacgttgcaaaacagatcgtggcggcacgtgag
gaaaaagaatttctctcgaaacaagatttaaaggagcgggggaaggtttccaatacctta
attgagtttatgacagaaaatcatgtgcttgatgcattaccagacgaaaatcagttaagt
ttatttgatttttaa
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integrated database retrieval system
