Limosilactobacillus gastricus: LG045_03675
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Entry
LG045_03675 CDS
T07129
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lgas
Limosilactobacillus gastricus
Brite
KEGG Orthology (KO) [BR:
lgas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgas03016
]
LG045_03675 (truB)
Enzymes [BR:
lgas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LG045_03675 (truB)
Transfer RNA biogenesis [BR:
lgas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LG045_03675 (truB)
Prokaryotic type
LG045_03675 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TPR_Slam
DnaT_2
Motif
Other DBs
NCBI-ProteinID:
QGF40269
LinkDB
All DBs
Position
738450..739349
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AA seq
299 aa
AA seq
DB search
MDGIIPLYKERGMTSFDCVSRLRRILHTKKIGHSGTLDPNVDGVLPICVGNGTKVVEYLM
NSGKEYVGEVLIGQATTTEDLDGELVETKTVPQAIPAAQIQAVMDQMTGQITQIPPMYSA
VKVKGKRLYEYARAGETVERPQRQVTISSFRLISTDYDESSQTQRARFVVACSKGTYVRT
LAVDLAKQLGYPGVMSQLTRKKSGGFEIDQTLSLADVQDMVSEEMMGRYIYPVDYALKDL
PHHELSADQWSGVQNGVWLKANELSTDAKRVVLTYRDDAKAIYQYRDQVYKPEKMISTK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatggaattattcccttatataaagagcgtgggatgaccagctttgattgtgtcagt
cgcttgcgacggattttacatactaaaaagattggtcattcggggaccttggaccccaat
gtggatggggtcttaccaatttgtgttggtaatggcactaaggttgtcgaatacctaatg
aattccggaaaagaatacgtgggggaagtactgattggtcaggcaacaacgacggaggac
ttggatggtgaattagtggaaactaagacagtccctcaagctattccggcggcgcagatc
caagccgtgatggaccaaatgactggtcaaatcactcagattccacccatgtactcggcg
gtaaaggtcaaaggtaagcgactttatgaatacgcccgggcaggtgaaacggtcgaaagg
ccccaacggcaggtgacgatatcgtcctttcgcttgatttcaacggattatgatgaaagt
agccaaacacaacgggctcggtttgtggtagcctgtagtaagggaacttatgtccgaact
ttggcggttgatttggccaaacaactaggctatcctggggtcatgagtcaattaacccgg
aaaaagagcggtggctttgaaattgatcagacgcttagtttggctgatgttcaagatatg
gtgtctgaagaaatgatggggcgttatatttacccagtggactatgctttaaaggatcta
ccacaccatgaattatcggcggatcaatggtctggcgtgcaaaatggtgtttggcttaaa
gctaacgagttgtctacagatgcgaagcgagtagtcttaacttaccgtgatgatgccaaa
gcgatttaccaatatcgggatcaggtttataaaccagagaaaatgatttcaacgaagtaa
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