Limosilactobacillus gastricus: LG045_04580
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Entry
LG045_04580 CDS
T07129
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lgas
Limosilactobacillus gastricus
Brite
KEGG Orthology (KO) [BR:
lgas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgas03032
]
LG045_04580 (topA)
03400 DNA repair and recombination proteins [BR:
lgas03400
]
LG045_04580 (topA)
Enzymes [BR:
lgas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LG045_04580 (topA)
DNA replication proteins [BR:
lgas03032
]
Prokaryotic type
DNA Topoisomerases
LG045_04580 (topA)
DNA repair and recombination proteins [BR:
lgas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LG045_04580 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Zn_Ribbon_TF
DmmA-like_C
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QGF40429
LinkDB
All DBs
Position
complement(934850..937000)
Genome browser
AA seq
716 aa
AA seq
DB search
MHKFIEECLKLATKTTTKKSTKKKTTRKAPQKKLVIVESPSKAKTIEKYLGRTYKVVASV
GHVRDLPKSRMGVDIENDYQPEYISIRGKGSVIKELKKDAKNAKAVYLASDPDREGEAIA
WHIATLLKDSNENLNRVTFNEITKDAVKESFNEPRQINMNLVDAQQARRVLDRLVGYSIS
PILWKKVKKGLSAGRVQSVALNLIIKRENEINNFKPEEYWTLDAEFKKGREKFAASFYGI
DGQKTKLPNNEAVQQVLGQLDRKAPFLIENVERKERRRAPQPPYTTSTLQQDANRRLNFR
TRKTMMAAQQLYEGINIGQGAAVGLITYMRTDSTRISELAKHQAAEFIHDQYGAEYAATK
PRKGKLPEGAQDAHEAIRPTSVLRTPASIKQYLTNDQYKLYNLIWCRFVASQMTAQVTDT
MTVTITQGQVNFRANGSKVKFPGFTKVYKRGDEKDNLLPDLAVGDQVTMVKDDPAQHFTQ
PPARYTEAALVKALEENGVGRPSTYAPTLDTIQRRYYVRLVSRHFEPTELGEIVDTIISE
QFPEIVNVKFTADVEQNLDAVEAGKENWVKVIDDFYQPFAKEVAQAEDQVAKIEMRDELA
GQDCDICGAPMVIKMGRYGKFYACSRFPNCRNTKAIVKDTGITCPKCGQGTVVERKSKRN
RTFYGCSRYPDCDFVSWDRPIDRKCPKDGHFLVEKKVKGGKQVVCPNGDYQEEVQK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcataaatttatagaggagtgcctcaaattggctactaaaacaacaacgaagaaatca
acaaaaaagaaaaccactcggaaggctccgcaaaagaaattagtgattgtagaatcacct
tcaaaggcgaaaacgattgaaaaatacttgggacgtacttacaaggtcgtggccagtgtt
ggtcatgtacgtgatctgccaaagagtcggatgggggttgatattgaaaatgattatcaa
cctgaatatatttcaattcggggaaaaggtagtgtcatcaaggaattaaaaaaggatgcc
aaaaatgctaaagccgtttatttagcatccgatcccgaccgggagggggaggcaattgct
tggcatattgccactctcttgaaagattccaatgaaaatttaaatcgcgtgacctttaat
gaaattaccaaggacgctgttaaagaatcatttaatgaaccgcgacaaattaatatgaac
ttggttgatgctcaacaagcacgtcgggttcttgatcggttggttgggtattcaattagt
cccatcctttggaaaaaggtcaaaaaaggattgagtgcggggcgtgtccaatcagtggcc
ttaaacctgattattaaacgcgagaatgaaattaataatttcaaacccgaagaatattgg
actttggatgctgaattcaaaaaaggtcgtgaaaaatttgcggccagtttttatggcatt
gatggtcagaaaaccaaattacctaataatgaggcggtccaacaggtcttgggtcaatta
gatcggaaggcgccatttttaattgaaaatgtggaacgtaaagaacggcggcgcgctccg
caacctccttatacgacttctaccttacaacaagacgccaaccgtcggttaaatttccgg
acacggaaaacgatgatggcagcccaacagttgtatgaagggatcaatattggtcaaggt
gcggcagtggggttaatcacctacatgcggacggattccacgcggatttcggaattagct
aaacatcaagcggccgaatttattcatgaccaatatggggctgaatatgcggccaccaaa
cctcgaaaaggaaaattaccggaaggggcacaagatgcccacgaagccatccgaccaacc
tcagttttgcgaacaccggcttcaattaagcagtatttaactaatgaccaatataaatta
tataacttaatctggtgtcgcttcgtcgctagtcaaatgacagcgcaagtgaccgacacc
atgacggtaactattacgcaaggtcaagttaatttccgggctaatggctcaaaggttaag
ttccctggttttaccaaggtttataaacggggggatgaaaaggacaatttgttaccagat
cttgcggtgggggaccaggtaacaatggtgaaagacgatccggcccaacactttacgcaa
ccaccggcccgctatacggaagcggccttggttaaagccttagaagaaaatggggtcgga
cgcccatcaacttatgcgccaactttagatacaattcaacgccgctactatgtccgtcta
gtatctcggcattttgaaccgactgaattaggcgaaatcgtcgatacgattatttcggaa
cagttccccgaaattgtcaatgtaaagtttacggctgatgttgaacaaaatttagatgcg
gtggaagcaggtaaagagaattgggtcaaagtaattgatgacttttaccaaccatttgct
aaagaagttgctcaagctgaagatcaagtcgctaaaattgagatgcgcgatgaattagct
ggacaggattgtgacatctgtggtgctcctatggttattaaaatggggcgatatggtaag
ttttatgcttgctctcgtttcccgaactgtcgcaataccaaagcaatcgtgaaggatacg
gggattacttgtcccaaatgtggtcaaggaaccgttgtggaacgtaagtcgaaacggaac
cggaccttttacggttgttcgcgttacccagattgtgatttcgtatcatgggaccgacca
attgatcgtaagtgtcctaaagacggtcacttcttggtcgaaaagaaggtcaagggcggc
aaacaagtggtttgtccgaatggtgattaccaagaagaagtgcaaaaatag
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