Limosilactobacillus gastricus: LG045_04675
Help
Entry
LG045_04675 CDS
T07129
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lgas
Limosilactobacillus gastricus
Pathway
lgas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LG045_04675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgas03019
]
LG045_04675
03400 DNA repair and recombination proteins [BR:
lgas03400
]
LG045_04675
Enzymes [BR:
lgas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LG045_04675
Messenger RNA biogenesis [BR:
lgas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LG045_04675
DNA repair and recombination proteins [BR:
lgas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LG045_04675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
Helicase_C_2
KORA
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QGF40447
LinkDB
All DBs
Position
complement(953573..955018)
Genome browser
AA seq
481 aa
AA seq
DB search
MATIQAQLKQILHDKFGFDHFRPGQLATLEALLTGQPTLAVLPTGAGKTLLYQLPAYLLK
GPILIVSPLISLMQDQLNRLRQQGLKKAAMLNSTIGYQDRQLILNHLSDYQFIFTSPEML
AKETNLAAFKRQGVAMMVIDEAHCISQWGPDFRPEYLLLKEVIKSLQPAKLLMLTATATP
NTRQDIIDRLGLTSQQVHQIVQSVNRENIFLAVEKVFNPDEKRQRLVELLQQLGGQGIIY
FSSRALANEMSAYLSAVTDYQVAAYHAGISDVDRYRIQQQFMHDELQIVCATSAFGMGID
KDNIRYVIHYHLPNSLENYVQEIGRAGRNGQQALAILLYAPGDIQIPRLLTSVEVPPISV
MEQFNKGGVPIEALGPQAEVIAFYLSHQTSPQVIKQLFHEQEQKVQARLDKMMEYLQTQT
CRRQVILNYFGESKIEQGQLCCDVDLPHWTVSNLDLPAEVSRSLPNSQLDWRRRLNSFFN
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcgactatacaagcacaacttaaacagattttgcatgataaatttggctttgatcac
ttccgtccaggtcaattagcgactttggaagctcttttaaccggtcaaccaaccttggca
gtgctaccaactggggcagggaaaacccttttatatcagttgccagcttatttattgaag
ggaccgattttaattgtttcgcccttaatttccttaatgcaagatcaattaaatcggctc
cgccaacaagggttgaaaaaggcggcgatgttgaactccaccattggttaccaagatcgg
cagttaatccttaatcatttaagtgattatcaatttatctttacctcaccagaaatgtta
gctaaggagactaacttagcagcttttaaacggcagggggtggccatgatggttattgac
gaagcccactgtatttcacaatgggggccagattttcgaccagagtatctcttgctcaaa
gaagttattaaaagtttacaacccgcaaaattattaatgttaacagccacagctactccg
aatacccgccaagatattattgatcgattgggattaacatctcagcaggtgcaccagatc
gttcaatcggtcaatcgggaaaacatttttttagccgtcgaaaaagtttttaacccagat
gaaaaacgacaacgattggttgagttattacagcaactcggtggccaagggattatttat
ttttctagtcgagctttagctaatgaaatgtcggcttatttatcggcggtaactgattat
caagtcgccgcttatcatgctggtatctcggatgtagatcgttaccgaattcaacaacaa
tttatgcatgatgaactacagatagtatgcgcaaccagtgccttcgggatggggattgat
aaggataacatcagatatgtcattcattatcatttacccaatagtttagaaaattatgtc
caagaaatcggccgtgctggccgtaatgggcaacaggcgcttgcaatcttgctctatgcg
ccaggagacatccaaattcctcgattgttaacctcggtagaagtgccaccaattagtgta
atggaacaatttaataaaggtggcgtaccaatagaagcactgggaccgcaagctgaagtg
atcgctttttaccttagccatcaaaccagtccgcaagtaattaaacaattgttccatgaa
caggaacaaaaagttcaggcacgattggataaaatgatggaatatttgcagacacaaact
tgtcgtcgccaggtcattcttaattattttggtgaatcaaaaattgaacaaggtcagctt
tgttgtgatgttgacctgccacattggacggtatcaaatctagatttaccagcagaagtt
agtcgatccttaccaaatagtcaattagattggcgaagacgactaaattcattttttaat
ctttaa
DBGET
integrated database retrieval system
