Limosilactobacillus gastricus: LG045_05975
Help
Entry
LG045_05975 CDS
T07129
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lgas
Limosilactobacillus gastricus
Pathway
lgas03030
DNA replication
lgas03410
Base excision repair
lgas03420
Nucleotide excision repair
lgas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG045_05975 (polA)
03410 Base excision repair
LG045_05975 (polA)
03420 Nucleotide excision repair
LG045_05975 (polA)
03440 Homologous recombination
LG045_05975 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgas03032
]
LG045_05975 (polA)
03400 DNA repair and recombination proteins [BR:
lgas03400
]
LG045_05975 (polA)
Enzymes [BR:
lgas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG045_05975 (polA)
DNA replication proteins [BR:
lgas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LG045_05975 (polA)
DNA repair and recombination proteins [BR:
lgas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LG045_05975 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LG045_05975 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QGF40670
LinkDB
All DBs
Position
complement(1196941..1199604)
Genome browser
AA seq
887 aa
AA seq
DB search
MAKQLLLIDGNSIMFRAFFAMHNQLERFTNQDGLHTAAIYGFKLMLDHVLAEYHPDAALV
AFDAGKVTFRTQLFDDYKGSRDKTPSELTEQIPYVRRLVQDSGIQSYELSNYEADDIIGT
LAQEADQAGYETTIITGDRDLTQLVTPQTTVAVTKKGVTQTKDYTPEYMQEKLGVTPVQY
IDVKALMGDSSDNYPGVTKIGEKTAVSLIQEYGSLDGLYEHVQDMKPSKRKENLINEEKI
ARECQTLATIKRDAPVEVQLTDLTYQGPDQEALAELYRELNFQSFLSQMGVEAPVPTVKP
VQYVELTADNLSLLDQFKTSLVFHLEMLEANYHLAQPVGFVLGRPDCWLVSRDINLLQKP
EIKQLLANDGIKKDVFNAKAQLVALHRLGVSLHHVAFDLLLASYLLDTNENSDDLGLLAQ
VHDYHDVQPDEVVYGKGAKQAVPEDNEVFYTHLANKARAIYELRQPLFDQLKANEQLSLY
TDIELPLSAVLAQMEIDGVMVKTSTLTQMQSQLTERLSELEQAIYQAAGEEFNINSTKQL
GVILFEKLKLPVIKKTKTGYSTAVSVLEKLRDQAPVVDLILQYRQIAKIQSTYVTGLLKV
IHPDDHKIHTRYLQTLTQTGRLSSVDPNLQNIPVRVEEGRRIRQAFVPSEAGWEIFSSDY
SQVELRVLAHVSGDQNMQADFINGEDIHAATARRIFHLLPDEEVTPNMRRQAKAVNFGIV
YGISDYGLAQNINVSPKQAKTFIESYFAEFPGVHDYTKSIVETARQQGYVETITHRRRYL
PDIHAKNFNLRSFAERTAMNTPIQGSAADIIKIAMIRMGPALAAHHLQARMLLQIHDELV
FEAPKEELATLRQVVTEVMDSAVKLSVPLKVESKVGPTWYDLKKIED
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaattattattgatcgatggtaatagtattatgtttcgggctttcttcgcc
atgcataatcaattagagcgatttacgaatcaagatggcttacataccgcagcgatttat
ggatttaaactaatgcttgaccatgtcttagcagaatatcatccggatgcagcgttggtg
gcttttgatgcgggaaaggttacttttcgaactcagttgtttgatgattacaaggggagt
cgtgataaaacgcctagtgaattaaccgaacagattccctatgttcggcggctggttcag
gatagcggaattcaaagttatgagttgtctaattatgaagccgatgacattattggcacc
ttagcccaagaagctgatcaagcgggatacgaaactacgattattaccggtgatcgggat
ttaacccaattagtgactccgcaaaccacggtggcggtaacgaaaaaaggggtaacccaa
acgaaagattatacgcccgaatatatgcaagaaaaactgggcgtgacgccggttcaatac
attgacgtaaaggcgttaatgggggatagctcggataattatcctggcgttactaagatt
ggtgaaaaaacagcagttagtttgattcaagagtatggctctctcgatggcttatacgag
catgttcaagacatgaaaccaagtaagcgaaaggaaaacctaatcaatgaggaaaagatt
gctcgggaatgccaaactttagcgacgatcaaacgtgatgccccagtcgaagtgcagcta
acagatttaacctatcaaggacctgatcaggaagccttagcggagttatatcgggaatta
aacttccaatcgtttttgtctcaaatgggcgttgaagctcccgtaccgactgttaaaccc
gttcaatacgtagaattaacggcggataatctatccttactagatcaatttaagaccagc
ttggtttttcatctagaaatgttagaagcaaattatcatttggctcaaccagttggcttt
gtcttaggtagacccgattgttggttagtgagtcgggatattaaccttttgcaaaaacca
gaaattaagcaattattagctaatgatggaatcaaaaaagatgtctttaatgcgaaggca
caactggtagccttgcatcgattaggggtgtcgcttcatcacgtagcatttgatttatta
ttagcctcttatctgttagatacaaatgaaaatagtgatgatctaggtttattagcccaa
gttcatgattatcatgatgtgcaacctgatgaagtagtctacggcaaaggggcgaaacag
gctgtgccagaggataatgaagttttttacacgcacttagctaataaggctcgcgccatt
tatgaattgcggcagccactgtttgaccagttaaaggcgaatgaacaactatccttatac
actgatattgaactgccactgtcagcggttctggctcaaatggaaattgatggtgtaatg
gtgaaaactagcactttaactcagatgcaaagccaactaacggagcggttaagtgaacta
gagcaagcaatctatcaagctgctggtgaagaattcaatattaattcaactaaacaatta
ggggtaattctttttgaaaagttaaaattaccagtaataaagaagaccaagactggttat
tcaacagcggtgagtgttttagaaaagctacgtgaccaggccccagtagttgatttgatt
ttacaatatcggcagattgccaaaattcagtctacctatgtgaccgggttgctgaaggtt
attcaccctgatgaccataagattcacactcgctatctacaaactttgacgcaaacagga
cggctgtcttcagtcgaccccaatttacaaaatattccggttcgtgtcgaagaaggtcga
cgaatccgacaggcctttgtaccgagtgaggcgggttgggaaatcttctcgtcggattac
tcacaagtggaactgcgggtgttagcccatgttagtggcgatcaaaatatgcaagcagac
tttatcaatggtgaggatattcacgcagcaactgcccgacggatctttcacctcttacct
gacgaagaagttacccctaacatgcggcgtcaagcgaaggccgtcaattttgggattgta
tatggaattagtgattacggactagcccaaaatattaatgtcagtcctaaacaggcgaaa
acttttattgagagttattttgctgaatttccaggagtccatgactataccaagtcgatt
gtcgaaactgctcggcagcaaggttatgttgaaaccattacccatcggcgtcggtatttg
ccagatattcatgctaaaaactttaatttgcgttcttttgctgagcggaccgctatgaat
acacctattcaagggagcgcggctgatattattaaaattgccatgatcagaatgggacca
gcgcttgctgcacatcatttgcaagctcggatgctcctgcaaatccatgacgaattggta
tttgaagcaccgaaagaagagttagccacccttcgtcaagttgtgacggaggtgatggat
tcggcggttaagttatccgttccgctaaaagttgaaagtaaagttggaccaacttggtat
gatttaaagaaaattgaggattaa
DBGET
integrated database retrieval system
