Limosilactobacillus gastricus: LG045_06900
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Entry
LG045_06900 CDS
T07129
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lgas
Limosilactobacillus gastricus
Brite
KEGG Orthology (KO) [BR:
lgas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgas03019
]
LG045_06900
03009 Ribosome biogenesis [BR:
lgas03009
]
LG045_06900
Enzymes [BR:
lgas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LG045_06900
Messenger RNA biogenesis [BR:
lgas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LG045_06900
Ribosome biogenesis [BR:
lgas03009
]
Prokaryotic type
rRNA helicases
LG045_06900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QGF40810
LinkDB
All DBs
Position
complement(1356445..1357827)
Genome browser
AA seq
460 aa
AA seq
DB search
MAGNFKDYHFPEFVNQAIQDLKFKTPTPVQQKVIPQILKGKSVVGQSQTGSGKTHAFLLP
IMAQLKVDVQQVQVVITTPSRELAYQIYQAAKQINQFSSQAFSIHNYVGGTDKEHQIDQL
GRNQPQMVIGTPGRILDLVKSQALDIHLAKQFVIDEADMTLDMGFLNQVDQIAAYFPENL
QMMVFSATIPQGLRPFLKKYMGNPEIEEIPTETVINPNVENWLMSTKGRDKNDLLYQLLT
MGDPYLALVFANTRERAEEINRYLTDQGLKVALIHGGLEPRMRKRVMRQIHNLDYQYVVA
TDLAARGIDIEGVSLVINDDIPSDLEYFVHRVGRTGRAKMQGTAITLYAPAEDDLISKLE
ERGIKFIPKVIKDGQIITTYDRNRRRDFRHKQKELDPTIKGYVKKQKRKVKPGYKRKIKR
RIKQDELQKRRLEQRHEFLKGKRQRQRQHRAERQNQRNGR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaattttaaagattatcactttccggaatttgtgaatcaggcgattcaagat
cttaaatttaaaacgcctacaccagtgcagcaaaaagtgattccacaaatattaaagggc
aagagtgtagttggtcagtcacaaaccggtagtgggaaaacccatgcctttttgttgcca
atcatggctcaattaaaggtcgatgttcaacaggttcaagtcgtgattacgacaccaagt
cgggagttagcttaccaaatttatcaagccgctaagcagattaatcagttcagttcgcag
gcttttagcattcataattatgtcggtggaacagataaggaacatcagattgatcagtta
gggcgtaaccaaccgcaaatggtgattgggacgccggggcgaattctagatctagttaaa
tctcaggccttggatattcatttagccaaacaatttgtgattgatgaggccgacatgacc
ttggacatgggttttttaaatcaagttgatcaaattgcagcttattttccagaaaacctc
cagatgatggtcttttctgcgacaattccgcaaggattacgcccattcttaaagaaatac
atgggtaatcccgaaattgaagaaattccgaccgaaacagtcatcaatcccaatgttgaa
aactggttgatgtcaacgaaaggtcgcgataaaaacgacctattgtatcaattattaacc
atgggtgacccatacttggcattggtgtttgcgaatacccgagaacgagccgaagaaatt
aatcgttacctaactgatcaaggcttaaaagtagctttgattcatgggggactggaacca
cgaatgcgcaagcgggtgatgcggcaaatccataacctggattaccaatatgttgtggct
actgatttagcagctcgtggaattgatattgaaggagtatccctagtcatcaatgatgat
attccgagtgatttggaatattttgttcatcgtgtaggtcggacagggcgtgccaagatg
caagggacagccattactttgtatgcgccagccgaagatgacttaattagtaaattagaa
gaacgcggaattaaattcattcccaaagtcattaaagatgggcagatcatcactacttat
gaccggaaccgccggcgagacttccggcataagcaaaaggaattagatccaacgattaag
gggtacgttaagaaacaaaaacggaaggttaaaccaggttacaaacggaagatcaaacgg
cgaatcaaacaagatgaactacaaaaacggcgattagaacaacggcatgagttccttaag
ggaaaacgccaacgccaacgccaacatcgggctgaacgacaaaatcaacggaatggtcgt
tga
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