Limosilactobacillus gastricus: LG045_07645
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Entry
LG045_07645 CDS
T07129
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lgas
Limosilactobacillus gastricus
Brite
KEGG Orthology (KO) [BR:
lgas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgas03400
]
LG045_07645 (radA)
DNA repair and recombination proteins [BR:
lgas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LG045_07645 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
Lon_C
ABC_tran
GvpD_P-loop
AAA_16
AAA
AAA_24
divDNAB
SLFN-g3_helicase
AAA_14
nSTAND3
AAA_5
AAA_22
nSTAND_NTPase5
NTPase_1
GTP_EFTU_D4
Rad51
zf-RING_10
HypA
DUF7129
NPHP3_N
ATPase_2
DZR
Ribosomal_S10
Motif
Other DBs
NCBI-ProteinID:
QGF40934
LinkDB
All DBs
Position
complement(1507356..1508729)
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AA seq
457 aa
AA seq
DB search
MAKAKVHYVCQNCGYNSPRFLGRCPNCGEWNTLVEKVEQTSVAAATKATTTLTGIVARPQ
KINEIDTKKTPRVKTKLRELNRVLGGGIVPGSLVLIGGDPGIGKSTLLLQVSGQLSLENH
PVLYISGEESANQIKMRAQRIAVSGDNFYIYPETNMDSIRATIDNLKPEYVVIDSVQTMQ
ASGVESAIGSVAQIRAVTAQLMQIAKGENITVFVVGHVTKGGTIAGPKILEHMVDTVLYF
EGDSHHTYRILRSVKNRFGSTNELGIFEMHDTGLTEVANPSEMFLEERLKDATGSAVVVS
LEGTRPILVEVQALITPTVFGNAQRTASGLDRNRVSLIMAVLEKRANLLLQNQDAYLQAA
GGVKLNEPAIDLALAISIASSYRDKGTRPTDAFIGELGLTGEVRRVSRIEQRVAEAAKLG
FQRVFIPKNNLQHWTPPTNIEVVGVATINEALKLALS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaaaagtgcattatgtttgccagaactgtggttataattcaccccgcttc
ttagggcgttgtccaaattgtggtgagtggaatactctagttgaaaaggtggaacaaacc
agtgtggctgcagcgactaaggctacaaccactttgacggggattgtggctcgtccccaa
aaaattaatgagattgatacgaaaaagacgccacgggttaaaactaaattacgcgaatta
aatcgggtcctaggtggcgggattgtaccaggttcgttagtgttgattgggggagatcct
gggattgggaaatcgaccctcttgctacaagtctctggacagcttagtctggaaaatcac
cccgttttatatatttcgggggaagaaagtgcgaatcaaatcaagatgcgggctcaacga
attgcagtttcgggagacaatttttatatttatccagaaaccaatatggatagcattcgc
gctacgattgataatttgaaacctgaatatgtggttattgattcggtccaaaccatgcaa
gcatcaggagttgaatcagccattgggagtgtcgcgcaaatccgagccgtcaccgctcaa
ttaatgcagattgctaagggggaaaacattacggtgttcgtggtcggccatgtaaccaaa
ggtggaacgattgcgggtcctaaaattttggaacacatggttgatacggtcctttatttt
gagggggactctcatcatacttaccggattttacggtcggttaaaaatcggtttggctcc
actaatgaattaggcatcttcgagatgcatgatacgggattaactgaggtggcgaatccc
tcggagatgtttttggaagaacgcttaaaagatgctaccggatcggcagtagttgtttcc
ttggaagggacgcggccgattctagtagaggtgcaagccctgattacgcctaccgtattt
gggaatgcccagcgaaccgcatcaggtttggatcgaaatcgggtttcgttaatcatggct
gttttggaaaaacgggctaatttactcttacaaaatcaggatgcctatttacaagcggct
gggggcgtaaagttaaacgaaccagcgattgatctagccctagccatcagtattgcttcg
agttatcgcgacaaagggacccgaccaacggatgcttttattggtgaattaggtttgacg
ggggaagttcggcgagtaagtcgtattgaacaacgagtggccgaagccgctaaattgggt
tttcaacgggtctttatcccgaaaaataatttgcaacattggacaccaccgaccaatatt
gaagtggttggggttgccactattaatgaagctttaaaattagctttatcttaa
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