Leminorella grimontii: V8L73_09270
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Entry
V8L73_09270 CDS
T10343
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lgb Leminorella grimontii
Brite
KEGG Orthology (KO) [BR:
lgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgb03016
]
V8L73_09270
Enzymes [BR:
lgb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
V8L73_09270
Transfer RNA biogenesis [BR:
lgb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
V8L73_09270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Rho_RNA_bind
PilZ
Glyco_transf_88
DUF2274
ODP
Motif
Other DBs
NCBI-ProteinID:
XBC27649
LinkDB
All DBs
Position
complement(1956202..1958145)
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AA seq
647 aa
AA seq
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MFQDNPLLAQLKQQLHATAPRVEGIVKATEKGFGFLEADNQKSYFIPPPQMKKVTHGDRI
IATLHSQNDKEQAEPETLVEPFLTRFIARVVKKGERLFVQSDHPMVKDVFPAKVKSDVPT
PLNEGDWVVAEMKGHPLSGERGFSALITEFITFSGDHYAPWWVTLSRHQLEREAPQWTPC
DIQDDGIVRRDLSPLHFVTIDSESTQDMDDALYVERGDNDILKLFIAIADPTAYVSEGSE
LDVIAQTRVFTHYLPGFNIPMLPRDLSENLCSLQPNERRPALVCQVSISADGALSEDIEF
FSAWVTSKDKLDYDHVSDWLEGKDGWQPQSEPSAEQIRLLNQIALRRIEWRTQHALVFKD
RPDYRFILGENGAVLDIVTERRRIANRIVEESMITANVCAASVLKQKLGYGIFNTHAGFD
PALVEQAVDVLRNNGISFDKDELLTLEGFCRLRRLLDAQPTSYLDGRIRKYQTYAEVSTE
PAPHYGLGLEAYATWTSPIRKYGDIINHRLLKALIHGQPSTAPDRSVIQPLSDRRRANRL
SERDVSDWLYARFLQDKAGNGVHYQAEIIDVSRGGMRVRLLDNGAVAFVPAPFIHAVRDE
LTCSSESGTVILKGEPLYRQGDTISVTVEEVRIETRSVIARPAPSLA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgcttgcccagcttaaacagcaactccacgccaccgcgcct
cgcgtagaaggcatcgtcaaagcaacggaaaaaggctttggatttcttgaagcggacaat
caaaagagctatttcattccaccgccgcagatgaaaaaagtgacccatggcgacagaatt
attgcaacgctgcactcccaaaatgacaaagagcaggcagagcctgaaacgctggtagaa
ccctttctgacgcgctttatcgcccgcgtggtaaaaaaaggcgagcgcctgttcgttcag
tccgatcacccgatggtaaaagacgtctttccggcaaaagtgaaaagcgacgttcctacg
ccgcttaacgaaggcgactgggtcgttgcagaaatgaagggccatccgctcagcggagag
cgcgggttcagcgcgctaataaccgaatttatcacctttagcggcgatcactatgcgccg
tggtgggtgacattgtcacgtcaccagctggagcgagaggcgccgcagtggaccccttgc
gacattcaggatgacggcattgttcgtcgcgacctaagcccgctgcacttcgtcaccatt
gacagtgaatcgacgcaggatatggacgacgcgctttacgttgaacgcggcgataacgac
attctcaagctgtttatcgctattgccgatcctacggcctacgtcagcgagggaagcgag
ctggacgttatcgcacaaacacgtgtgttcacccactatcttcccggctttaatattccc
atgttgccaagggatttatcggaaaatttgtgttctcttcaaccaaacgagcggcgccct
gcgcttgtttgtcaggtatccatctcggctgatggcgctttgagtgaagatattgagttt
ttcagcgcctgggtaacgtcaaaagataagctggactacgaccacgtttctgattggctg
gaaggcaaagacggctggcaaccgcagagtgaaccatcggctgaacaaattcgcctgttg
aaccaaatcgcccttcgccgcatagagtggcgcactcaacacgccctggtgtttaaagac
aggcccgattatcgcttcattttaggagaaaacggcgccgttttagatatcgtgaccgag
cgccgccgcatcgctaaccgcatcgtcgaagaatcaatgattacggcaaacgtctgtgca
gctagcgtattaaaacaaaagctgggctatggaatattcaacacccacgccggcttcgat
cccgctctggttgaacaggccgtcgacgtattaagaaataacgggattagtttcgataaa
gatgaactcttaacgctggaaggcttctgtcgcctgcgccgtttgcttgacgcacagccg
acgtcctatctggacggccgcatcaggaaatatcaaacctatgcagaggtaagcactgaa
ccagccccccactatggcctggggcttgaggcctatgcaacctggacgtcgccgataaga
aagtacggagacatcattaaccaccgcttgcttaaagcgctcattcacggacaaccgtca
accgcgccggatcggagcgttatccagccgctgagcgatcgccgccgcgcaaatcgcctt
tctgaacgagacgtcagcgattggctctacgcccgatttcttcaggataaggccggaaac
ggcgttcattatcaggccgagattattgacgtatctcgcggcggaatgcgggtcagactg
ctggataacggtgcagtggcctttgtaccggcaccctttatccatgccgtacgcgatgaa
cttacctgtagctcagagagtggaacggttatattaaagggagagccgctatatcgtcag
ggtgacactatcagcgtgacggtcgaagaagttcgaatagagacccgctcagtcattgcc
agaccggcgccgtcgctcgcgtaa
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