Leminorella grimontii: V8L73_11140
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Entry
V8L73_11140 CDS
T10343
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
lgb Leminorella grimontii
Pathway
lgb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
V8L73_11140 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgb03400
]
V8L73_11140 (sbcB)
Enzymes [BR:
lgb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
V8L73_11140 (sbcB)
DNA repair and recombination proteins [BR:
lgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
V8L73_11140 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V8L73_11140 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V8L73_11140 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
XBC24339
LinkDB
All DBs
Position
2376400..2377830
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AA seq
476 aa
AA seq
DB search
MKDEKAQPTFYVHDYETFGISPAYDRPAQFAGIRTDADFNVIAEPQIVYCKPANDYLPDP
DAVMITGITPQEAQRKGVVEAEFAQQIHDQFSHPNTCIVGYNNVRFDDEVSRNLFYRNFF
DPYAYSWQQGNSRWDLLDVMRACYALRPEGIEWPLNEEGLPSFRLEHLTKANGVEHSHAH
DAMSDVYATIAMAKLVKQAQPKLFDYLYQHRGKRKIETLIDIVNMAPLVHVSGMFGAQRG
NTSWVAPLAWHPEMKTAVIVCDLAGDMSPLLELDADTLRERLYTRRDELPSGQSPVPLKL
IHTNKCPVLAPAKTLLPENAERLNIDRQRCLKNLQLLKEHPEVREKVVAVFGQPAEFPPI
SDVDGRLYDGFFSDADRTAIGIIRQTKPENLPALELSFNDDRLAPLLFRYRARNYPHTLD
DGELQRWHAHRQAVLTQERLLAYAEKIEALAEQHADSEEKIALLKQLYLYAQKLVG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgaaaaagcacagcccactttctatgtccatgattatgaaaccttcggcatc
agcccggcctatgaccgcccggcgcagtttgccggcattcgtaccgatgcagatttcaac
gttatcgccgaaccacagatagtctactgcaaacccgccaacgactaccttcccgacccc
gatgccgtgatgataacgggcattaccccgcaggaagcacagcgcaagggcgtggttgag
gccgagtttgcacagcaaattcacgaccagttcagccatccaaatacctgcatcgttggc
tataacaacgtgcgctttgatgacgaagtcagccgcaatctgttttatcgcaacttcttc
gacccttacgcctacagctggcagcagggcaactcgcgctgggatttactcgacgtaatg
cgcgcctgctatgcgcttaggccggaaggcattgagtggccgctaaacgaagaggggctg
cccagctttcgcctggagcacctgaccaaggccaacggcgtagagcacagccatgcgcac
gacgcaatgtccgacgtgtacgccactatcgctatggcaaagctggtcaagcaggcgcag
cccaagctgtttgactacctctatcagcatcgcggcaagcgaaaaatagaaacgctgatc
gacatcgtcaacatggcgccgctggtgcacgtttccggcatgtttggcgcacaaagggga
aataccagctgggtagcccccctcgcctggcatcctgaaatgaaaaccgcagttatcgtc
tgcgatctggcgggcgatatgtcgccgctgctggaactcgacgcagacacgctgcgcgag
cggctgtatacccgccgcgacgagctgccgtcagggcaatcgccggttcccctgaagctg
attcataccaacaagtgcccggtgctggcgccggccaaaacgctgctgccggaaaacgcc
gagcgtctgaacattgaccgtcagcgctgtctgaagaacctgcaactgctaaaagagcac
cctgaagtgcgcgagaaagtggtcgcggtatttggccaaccggcggaattcccgccgata
agcgacgttgacggccgcctgtacgacggctttttcagcgacgccgatcgaaccgccatc
ggcattatccgccagaccaagccggaaaacttgcccgcgctggaactgagcttcaacgac
gacaggcttgccccgctgctgtttcgctatcgcgcccgcaactatccgcatacgctggac
gacggcgaacttcagcgctggcacgcccaccgccaggcggtgctgacgcaagagcgcctg
ctggcctatgcggagaaaatcgaggcgctggccgagcagcacgccgacagcgaagaaaaa
atagcattgctcaaacagctctatctttacgcgcaaaaactggtagggtaa
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