Leminorella grimontii: V8L73_11485
Help
Entry
V8L73_11485 CDS
T10343
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lgb Leminorella grimontii
Pathway
lgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V8L73_11485 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgb03019
]
V8L73_11485 (rhlE)
Enzymes [BR:
lgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
V8L73_11485 (rhlE)
Messenger RNA biogenesis [BR:
lgb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V8L73_11485 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
XBC24405
LinkDB
All DBs
Position
complement(2457101..2458432)
Genome browser
AA seq
443 aa
AA seq
DB search
MSFDSLGLSADILRAVEEMGYRQPTPIQQQAIPVVLSGRDLMACAQTGTGKTAGFTLPLL
QRLITTSPAAKGGRRPVRALILTPTRELAAQIGENVSDYSRYLKIRSLVVFGGVSINPQM
MKLRGGVDVLVATPGRLLDLAHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLARLPA
KRQNLLFSATFSNDIRALASTLLHNPASVEVAPRNAPSELVDQKVHFVDKKRKRELLSHL
IGQGQWRQVLVFTRTKHGANHLSEQLNKDGISAMAIHGNKSQGARTRALEGFKQGNIRVL
VATDIAARGLDIEQLPHVVNYELPNVPEDYVHRIGRTGRAECNGEALSLVCVDEHKLLRD
IERLLKFEIPRMALPGYEPDPSIQAEPIVNGRQNRGQRGGGNGGGGRAQPSANRAPSAER
RGERQGQGQRRRKPQASRRPSEG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattctcttggcctaagcgccgatattctccgcgccgtagaagagatgggc
taccgccagcctacgccgatccaacagcaggccattcctgtggtactttccggccgcgac
cttatggcctgcgcccaaaccggcaccggtaaaaccgccggatttacgctgccgctgctg
cagcgcttgataacgacctctcctgccgccaaaggcggtcgtcgccccgtcagagcgctt
attttgacgccgacgcgcgaactggctgcgcagataggggaaaacgtgagcgactatagc
cgctacctgaaaatccgctctttggtagtgttcggcggcgttagcattaaccctcagatg
atgaagcttcgcggcggcgttgacgtactggtcgcgacgccgggccgcctgttggactta
gcgcatcaaaacgcggttgacctctctcaggttgagattttggtgctggacgaagccgac
cgcatgctggacatgggctttattcacgatattcgccgcgtgctggcgcgcctgccggcc
aaaaggcaaaacctgctgttttccgcgacgttttccaacgacatcagggcgctggcctct
acgcttttgcataatccggcctcggttgaggttgcgccgcgcaatgcgccgtcagagctg
gtggaccaaaaagtgcactttgtcgataagaagcgcaagcgcgagctgctgtcgcacctg
attgggcaagggcagtggcgtcaggtgctggtatttacccgcaccaagcacggtgctaac
catctgtctgagcagttgaataaagacggcatcagcgcgatggctattcacggcaacaaa
agtcagggggcaagaacgcgcgctcttgaaggcttcaagcagggaaatattcgcgtgctg
gtggcaaccgacatcgccgcccgtggattagacatcgagcagcttccccacgtcgtcaac
tacgagctgcctaacgtgccggaagactacgttcaccgcatcggacgcaccggtcgcgcg
gaatgtaacggcgaagcgctgtcgctggtctgcgtggatgagcacaagctgctgcgcgac
atcgagcgcctgctgaagtttgaaattccgcgcatggcgctgccgggctatgagcccgat
ccgagcattcaggctgagcctatcgttaacggtcgccaaaaccgcggccagcgcggcggt
ggtaacggcggcggtggtcgcgcccagccgtcggccaatcgtgcgccgtcggccgagaga
agaggcgagcgtcaagggcaggggcagcgccgccgcaagcctcaggcgtcgcgtcgaccg
tcggaaggttaa
DBGET
integrated database retrieval system
