Leminorella grimontii: V8L73_14720
Help
Entry
V8L73_14720 CDS
T10343
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lgb Leminorella grimontii
Pathway
lgb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lgb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V8L73_14720 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgb03021
]
V8L73_14720 (rpoD)
Transcription machinery [BR:
lgb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V8L73_14720 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Cwf_Cwc_15
DNA_ligase_A_N
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
XBC25006
LinkDB
All DBs
Position
3193002..3194855
Genome browser
AA seq
617 aa
AA seq
DB search
MEQNPQSQLKLLVTLGKEQGYLTYAQVNDHLPEDIIDSDQIEDIIQMINDMGIQVMEIAP
DADDLMLAENTADTDEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEEGINQVQCSVAEYPEAITYLLEQYDRVETGETRLSDLITAFIDPNADELGPAAT
HVGSELSSEEQDDDDSDDDDEDGEDSDSDSDEDIGIDPEMAREKFAELRDQYEATRKAIK
AHGRSNAKAQEEIVKLSDVFKQFRLVPKQFDYLVNNMRQMMDRVRTQERLILKLCVEQSK
MPKKNFVNMFAGNETNLEWFNGAVAMGKPWSEKLKEVGEEVERSIQKLQMIEEETGLTIE
QVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAV
DKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGR
EPLPEELAERMMMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSAT
SESLRSATHEVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALR
KLRHPSRSEVLRSFLDD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagcttaagcttcttgttaccctaggcaaggagcagggc
tatttaacctacgctcaggttaacgatcacctgccggaagatatcatcgactccgatcag
atcgaagatatcatccagatgatcaacgacatgggcattcaggttatggaaatcgcgcct
gatgccgacgatctcatgctcgctgaaaacacggcggataccgacgaagatgcagcagaa
gccgccgctcaggtgctttccagcgtagaatccgaaatcgggcgcaccaccgatcccgtt
cgtatgtacatgcgcgaaatgggaaccgttgagctgcttacccgcgaaggcgaaatcgac
atcgccaagcgcattgaagaaggtatcaaccaggttcagtgctccgtcgccgaatatccg
gaggctatcacctatctgcttgagcagtacgatcgcgtagaaaccggtgaaacccgtctg
tcggacctcatcactgccttcatcgatcccaacgcggatgaacttggcccggccgctacc
cacgtcggttctgagctgtccagcgaagagcaggacgatgacgacagcgatgatgacgat
gaagacggcgaagattctgattccgactctgatgaagacatcggcatcgatccggaaatg
gcgcgcgagaagttcgccgagctgcgcgaccagtatgaagcgacccgcaaggctatcaaa
gcccacggccgcagcaatgcgaaggcgcaggaagagatagtcaagctttctgacgtattc
aaacagttccgcctggtgcccaagcagtttgactatttagtcaacaacatgcgtcagatg
atggaccgcgtgcgcactcaggagcgcctgatcctcaagctgtgcgttgagcagagcaag
atgccgaagaagaacttcgtcaacatgttcgccggcaacgaaactaaccttgaatggttc
aatggcgcggtcgccatgggcaaaccgtggtctgaaaagctcaaagaggttggcgaagag
gtcgaacgcagcattcagaagctgcagatgattgaagaagagaccggattaaccatcgag
caggtcaaggacatcaaccgccgcatgtctatcggtgaagccaaggctcgccgtgcgaag
aaagagatggttgaagccaacctgcgtctggttatctctattgccaagaagtacaccaac
cgtgggctgcagttcctcgacctgattcaggaaggcaacatcggcctgatgaaggcggta
gacaagtttgaataccgccgcggctacaagttctcgacctatgccacctggtggatccgt
caggccatcacgcgttcgattgccgatcaggcgcgcaccatccgtattccggtgcacatg
atcgagacaatcaacaagcttaaccgcatctctcgccaaatgctgcaggaaatgggccgc
gagccgctgccggaagagctggccgagcgcatgatgatgccggaagacaagatccgcaaa
gtgctgaagatcgccaaagagcctatctccatggagacgccgatcggcgacgacgaagat
tcgcatctgggcgacttcatcgaggacaccaccctcgagctgccgctggactccgcgacg
tccgagagcctgcgctcggccacccacgaagtgctggccggccttaccgctcgcgaagcg
aaggtgctgcgcatgcgctttggtatcgacatgaacaccgaccacacgctggaagaggta
ggcaagcagtttgacgttactcgtgagcgtattcgtcaaattgaagcgaaagcgctgcgc
aagctgcgtcatccgagccgctcagaagtcctgcgcagcttcttggacgactaa
DBGET
integrated database retrieval system
