Leminorella grimontii: V8L73_15880
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Entry
V8L73_15880 CDS
T10343
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lgb Leminorella grimontii
Pathway
lgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V8L73_15880 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgb03019
]
V8L73_15880 (pnp)
03016 Transfer RNA biogenesis [BR:
lgb03016
]
V8L73_15880 (pnp)
Enzymes [BR:
lgb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
V8L73_15880 (pnp)
Messenger RNA biogenesis [BR:
lgb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
V8L73_15880 (pnp)
Transfer RNA biogenesis [BR:
lgb03016
]
Prokaryotic type
tRNA degradation factors
V8L73_15880 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
aRib
OB_RRP5_4th
S1_RRP5
S1_2
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
XBC25229
LinkDB
All DBs
Position
complement(3431889..3434000)
Genome browser
AA seq
703 aa
AA seq
DB search
MLNPIVRQFQYGQHTVTLETGMMARQATAAVMVNIEGTAVFVTVVAAKKMKEGQDFFPLT
VNYQERTYAAGRIPGGFFRREGRPSEGETLIARLIDRPIRPLFADGFLNEVQVIATVVSV
NPQVGPDIVAMIGASAALSLSGVPFNGPIGAARVGYINGSYVLNPTMDELKESQLDLVVA
GTESAVLMVESEAALLSEEQMLGAVMFGHEQQQVVINNIKALVAEAGKPKWNWQAPQTNQ
ALYARVDALANGRLSDAYRITDKQERYAQIDVIKADVIAALLAEDATLNGDEIGDMLGSI
EKNIVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVVATLGTAR
DAQNIDELTGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPSQEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITREIMKIALNQAKGARLHILSVMEQA
ISAPRGDISEFAPRIHTIKINPEKIKDVIGKGGAVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKHAIRRIEEITADVEVNRIYTGKVTRIVDFGAFVSIVGGKEGLVHISQIADKRVE
KVSDYLQLGQEVQIKVMEVDRQGRIRLSIKEAMAASDAPAAAE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatccgattgttcgtcaatttcagtacggtcaacataccgttacgttagaaacc
ggcatgatggcccgtcaggctactgccgcagttatggttaatatcgaaggtacggcggtg
tttgttaccgtcgtagcggcgaaaaaaatgaaagaaggtcaggacttcttccctctgacc
gttaactatcaggagcgtacttacgcggctggccgcatccctggcggcttcttccgtcgt
gaaggtcgtccaagcgaaggcgaaacgctgattgcccgccttatcgaccgcccaatccgc
cctctgttcgccgacggcttcctgaatgaagttcaggttattgcgacggttgtatccgtt
aaccctcaggttggccctgacatcgtcgccatgattggcgcctctgccgcgctgagcctg
tccggcgttccgttcaacggcccgatcggcgccgctcgcgttggctacatcaacggcagc
tacgtgctgaacccgacgatggacgagctgaaagaaagccagctggatctggttgttgcc
ggtaccgaaagcgcagtgctgatggttgaatcagaagccgcgcttctgagcgaagaacaa
atgctgggtgccgtaatgttcggtcacgagcagcagcaggtcgttatcaacaatatcaaa
gcgctggtggccgaagccggcaagcctaagtggaactggcaggcgccgcaaaccaaccag
gcgctgtacgctcgcgttgacgcgctggctaacggccgcctgagcgacgcttaccgcatt
accgacaagcaagagcgctatgcgcaaatcgacgttatcaaagctgacgttattgcggcg
ctgctggctgaagatgcgacccttaacggcgacgaaatcggcgatatgctgggcagcatt
gagaaaaacatcgttcgcagccgcgtgcttcgcggtgaaccgcgcattgacggtcgtgaa
aaagacatgatccgcggcctggacgttcgcaccggcgtactgcctcgcactcacggttct
gcgctgttcacccgcggtgaaactcaggcgctggtcgtcgcgacgctgggtaccgctcgc
gacgcgcaaaacatcgacgaactgaccggcgaacgcaccgacagcttcctgttccactac
aacttccctccgtactccgtaggggaaaccggtatggtgggttctccgaagcgtcgtgaa
attggtcacggccgtttggctaagcgcggcgttctggccgtgatgccgagtcaggaagag
ttcccgtacaccgtacgcgttgtgtctgaaatcaccgaatccaacggttcttcttccatg
gcctccgtgtgcggcgcctctctggcgctgatggatgcaggcgttcccgttaaggcggcc
gttgccggtatcgcgatgggtctggtaaaagaaggcgataactttgtcgttctgtcagac
attttgggtgacgaagaccacctgggcgacatggactttaaagttgccggtagccgtgac
ggtatctccgcgctgcagatggatatcaagatcgaaggcatcactcgcgaaatcatgaag
atcgcgctgaatcaggccaaaggtgcgcgtctgcacattctgagcgtaatggagcaggct
atctctgcgccgcgcggcgatatttccgagttcgccccgcgtatccacactattaagatc
aatcctgagaagatcaaagacgttatcggtaagggcggcgccgttatccgcgcgctgacg
gaagaaaccggtacgactatcgagatcgaagacgatggcacagtgaagatcgcggcgacc
gacggcgacaaggcgaagcatgctatccgccgcatcgaagagatcacggctgacgtagaa
gttaaccgtatctataccggtaaggttactcgcatcgttgacttcggcgcattcgtttcc
atcgtcggtggcaaagaaggcctggttcacatttctcaaatcgccgacaagcgcgtagag
aaagtgtccgactatctgcagctgggtcaggaagtacagatcaaggtgatggaagtcgat
cgccagggccgtattcgcctgagcattaaagaagcgatggccgcttctgacgcgccggct
gctgctgagtag
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