Leuconostoc garlicum: A9176_02270
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Entry
A9176_02270 CDS
T04802
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lgc
Leuconostoc garlicum
Pathway
lgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9176_02270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgc03019
]
A9176_02270
03400 DNA repair and recombination proteins [BR:
lgc03400
]
A9176_02270
Enzymes [BR:
lgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A9176_02270
Messenger RNA biogenesis [BR:
lgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A9176_02270
DNA repair and recombination proteins [BR:
lgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A9176_02270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
YjhX_toxin
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
AQN79284
UniProt:
A0ABN4WKF7
LinkDB
All DBs
Position
complement(462441..464240)
Genome browser
AA seq
599 aa
AA seq
DB search
MQKPREILKEVFGYDDFRTGQLDIIEKVLAHKHALAIMPTGGGKSITYQLPAVMFEGITL
VVSPLISLMKDQVDGLNAMGIDATFLNSTLTGQEQAQRMSDIRAGFYKMLYVSPERLEIP
SFFNFVQQLPIELIAIDEAHVMSQWGHDFRPSYLNILPLLAQIPGQPAVLGLTATATDRV
RQNLQQLLAVNDEDTVLTGFARDNLALKIAHQVDKRQYVQDYLRSNVGKSGIIYAATRKQ
VDELYDFLAKKGVKVGRYHAGLPEKERQAMQEAFLYDDVQVMIATNAFGMGINKPDVRFV
IHYAVPGNIEAYYQEIGRAGRDGLPSEAVLLYAPQDIHLQEFFVQKSEGTEAHKQNEYNK
IREMNAFANTETCLPRYLLSYFGELVTEDCGQCSNCLDARERVDVTTDAQRVLANVVRMN
QSFGKTLVAKVLKGSRDASVQKYAHLTTLPTFGLMKERTIKDISRFIDYLTADGYLRIEG
GEFPVLKLTDRGVQVLKGQLKVTKRVNQQVIAQRQTNVATDGLKLSDEDNQLFAKLKMKR
LALAREAGLPPFMIFSDKTLMNMAVLRPKTAAEFLAISGVGEKKFEIYHDDFAAVLAEA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaccgcgtgaaattttaaaagaagtctttggttacgatgattttcgtaccgga
caattagatattattgaaaaagtcttagcacacaaacatgcgctagcgattatgccaact
ggtggtgggaaatccatcacgtatcagctaccggctgtgatgtttgaagggattaccttg
gtggtctcgccgttaatttcgctgatgaaggaccaagtcgatggtctgaatgcgatgggg
attgacgcgacctttttgaactcaactttgacaggtcaagaacaggcgcaacgcatgtca
gacattcgggcaggcttttataaaatgttgtatgtgtcacctgaacgcttggaaattccg
agtttttttaattttgtccagcaactgccgattgaattaattgccattgatgaagcccat
gttatgtcacaatgggggcatgatttcagacccagttacctaaatattttaccgttactc
gcacaaattccaggccagccagcagtacttggtttgacggcgacggccacagatcgtgtc
cgtcaaaatttgcagcaattgctggcggttaatgatgaagacactgttttaaccggcttt
gcgcgtgataacttggcccttaaaattgcccatcaagttgataaacgccaatatgtccaa
gattatttgcgttctaatgttggaaaaagcggcattatttatgcggcaacgcgtaaacaa
gttgatgaattgtacgactttttggctaaaaaaggcgtcaaagttgggcgttatcatgct
ggattaccagaaaaagagcgtcaagcgatgcaggaagcctttttatatgatgatgtccaa
gtgatgattgccaccaatgcttttggtatggggattaacaagccggatgtgcgttttgtc
attcattacgccgtgccaggcaacattgaggcttattatcaagaaattggccgtgcgggc
cgtgacgggttgccgtcagaggcagttttattgtatgcaccgcaagatattcatttgcag
gaattttttgtgcagaagtctgaaggaaccgaagcgcataagcaaaatgaatacaataaa
attcgggaaatgaatgcttttgctaatacggaaacctgtttaccgcggtatctcttgagt
tattttggtgaattggtgaccgaagattgtggtcagtgttcgaattgtctggatgcgcgt
gagcgggtggatgtgacaaccgatgcgcaacgggtcttggccaacgttgtgcggatgaac
caaagttttgggaaaactttggtcgctaaagttctcaaaggttcacgggatgccagtgtg
caaaagtatgcgcatttaacgacattacccacatttggcttgatgaaagagcgaacgatt
aaagacattagtcgttttattgattatttaacggccgacggctatctgcggattgaaggc
ggcgaatttcccgtcttaaagctgacggatcgtggcgtgcaggtgctcaaggggcaatta
aaagtgaccaagcgggtgaaccagcaagttattgctcaacggcaaaccaacgtggcgact
gacggcttaaagttatcggatgaggataaccagttatttgctaagttaaagatgaagcgc
ttagcgcttgcgcgtgaagcaggcttgccgccatttatgattttctcagacaaaacactg
atgaatatggccgttctccgaccaaaaacagcggctgaatttttagctatttctggtgtt
ggtgagaagaagtttgaaatttaccatgatgactttgcggcggtacttgccgaggcgtaa
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