Leuconostoc garlicum: A9176_08105
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Entry
A9176_08105 CDS
T04802
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lgc
Leuconostoc garlicum
Brite
KEGG Orthology (KO) [BR:
lgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgc03400
]
A9176_08105
Enzymes [BR:
lgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A9176_08105
DNA repair and recombination proteins [BR:
lgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A9176_08105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
AAA_30
ResIII
AAA_12
EAD2
PRK
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AQN80309
UniProt:
A0ABN4WP04
LinkDB
All DBs
Position
complement(1606953..1610672)
Genome browser
AA seq
1239 aa
AA seq
DB search
MSTTFTVNQQRAVDDTGHNILVAASAGSGKTTVLIERLIQKILNGASVTNFLIVTFTNAA
AQEMRERLEVAIEKRLPAVDAATKRFLQEQLLLLPAANISTIDAYALRLIENYYHVIGLD
PQFRLLSDTAERDMLRQDVLAQVLAAFYEEDHEHHADFLALVHNFGQPGQDDALQDIILK
LTDFAEARPDGAAWLAQLADNQLDLTTAITQSDLYQQHILPTLTTTITPLLAAVKDAQVL
VSGAPELKKTTLALATIQDYLQQVQTMATSAQWDDLRQMLLQPPKVSLETKASKGVADEP
ELLAILAQAVAVKNQVIGAKSQLKQLTETFFRFTQSQWQTITDASQQLVATLVLVTQTFR
TAFTDAKRAAQLVDFPDLGALALEILADTATRETIQSQFDEILVDEYQDINQLQETLLTQ
VANGHNMYMVGDVKQSIYGFRQAEPSLFTHKYKQFAQADNDNQRIELADNFRSHNNVTAM
TNLIFTQLMDEKLGDIAYLGEAKLVPKADYPASVPPVFSVDIITKQAQAAEPTEADETVE
NFEKRQAQYARVAEKILALRETTIYDRKATPAGMRPVQYGDIAILTRSKAGYIDLVASLR
AAGIPVQVDAVGNYFQTMEVYLMLDVLRVIDNPHQDIPLVAVLRSPMFGLTENDLAEIRL
ADQQHDFWTALTTYATTHPAAQKIIDQIGKWHQLAIQNDLVTLIWTIFDDTAWLDYVAGM
PGGGQRQANLHALYAYARTYQNNTNAGLFRFVRYIEQLQQNDGQLGEAPQEADEQAVRVM
TIHASKGLEFPIVFIPEFDKAFNTKDLKGKVLLQKNAGIGINYLQPDALVSMPTLQQLVV
QQALKRQSWSEEMRLLYVALTRAEQQLHLIGSASVSETGQSAALQTLWQRAKNTTGQFLG
EDLRLTAKSYLDWLILALARTQEPTLEAWLGEGDKPRLLGPETTQTGQLTVNLIPEATIH
LPTDNTTPTEVATPNSQDYDAKDFQAAQAMLGYQYPNMAATQTAAYQSVSEMKRLFEDPD
RKQMVSLTVAENGQLSPANDLVPENLTLPTFMTDGSQQPSSAAIGTATHLMLQLLDFIVP
QTRESLAVLRDQLVANGRMTQPVADLINLDQILQFLATPFAQRVMQHAATLTREATFAMI
MPANQIYQGLADPAPVLVHGIIDGYFIDHTTQSITLFDYKTDYIRPDRMTEDLAKLAQRY
RGQLRLYQQALQQEYPTYTFHAPQLVALSVGRVVSLGVQ
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgacattcacagttaaccaacaacgtgcagttgatgatacagggcacaatatt
ttagttgccgcatcagcgggctctgggaaaacgacggttttaattgaacgtttgattcag
aaaattttaaacggggccagtgtgaccaactttttaattgtgacctttaccaatgcggca
gcgcaagaaatgcgggaacgtttagaggtagcgattgaaaaacggctgccagcagttgat
gcagcaaccaaacgctttttacaagaacagttgttacttttaccagcggccaatatttca
accattgacgcttatgcgttacgtttgattgaaaattattatcatgtcatcgggttggat
ccacaattccgattgctttcggatacagccgaacgtgatatgttacgccaagatgttctc
gctcaagttttggcggcgttctatgaagaagaccacgaacatcacgccgattttttggcc
ttagttcataattttgggcaaccaggacaagatgatgcgttacaagacattatcttaaaa
ctcacggattttgcagaagcacggcctgatggtgccgcgtggttagctcaactcgctgac
aatcagttagatttgacaacggcgattacgcaatctgacctgtaccaacaacatatccta
ccaacgctgacaaccactatcacaccgctattggcagcggttaaagatgcccaagttctg
gtgtccggggcgccagaactgaagaaaacaacgcttgcgttggccacaatacaagactat
ttgcaacaagtgcagacaatggccactagtgcgcaatgggatgatctccgccagatgctg
ttacagccacctaaggtgagtttggaaacgaaggccagcaaaggcgtggcggatgagcca
gaacttttggctattttggcccaagctgtcgcggttaaaaaccaagtgattggcgccaaa
tcacagttaaagcaactcacggagacgtttttccggttcactcaaagccagtggcaaacg
atcactgacgcctcacaacaactcgttgcgacgctagttttggtgacccagacgtttcgg
acggcgtttactgatgcgaagcgtgccgctcaattagtggactttcctgatttaggtgcc
ttagcattagagatattagccgatacggcaacccgtgaaacgattcagagtcagtttgat
gaaattttggtcgatgagtatcaagatattaaccaattacaagaaaccttactgacacaa
gttgccaatggtcataatatgtacatggttggtgatgtcaaacaaagtatttatggtttt
cgccaggcggaaccgtcgctatttacgcataaatataaacagtttgcgcaagccgacaac
gataatcagcgaattgaattagccgataatttccggtcacacaataatgtcacggccatg
accaacttaattttcacacagctcatggatgaaaaattaggggacattgcgtatttgggc
gaagctaagttggtaccaaaagctgactatccagccagtgtaccgccggtcttttcagtg
gacattattactaagcaggcacaggcagctgagccaacagaagctgacgagacggtggaa
aattttgaaaaacgacaggcccagtatgcccgagtagctgaaaagatactggcattgcgg
gaaacgacgatttatgaccgtaaggcaacgccggcggggatgcggccagtacaatacggg
gatattgcgattctgacccgctcaaaggctggctatattgacttagtagcgagtctgcgc
gccgctggtattccggtgcaagtggatgcggtagggaattattttcaaaccatggaagtt
tatctgatgctggatgttttgcgggtcattgataatccccaccaagatattccgttagtg
gctgtattacggtcgccaatgtttgggttaacggaaaatgacctggccgagattcgatta
gcggatcaacagcatgatttttggacggctttaacaacctatgcgacaacgcatccggct
gcgcaaaaaattatcgaccaaattggaaaatggcatcaactcgcgattcaaaatgattta
gtgacgttgatttggacgatttttgatgatacggcgtggctcgattacgtggcggggatg
ccgggtggcggtcagcggcaagcgaatttgcatgcgctctatgcctatgcccgaacttat
caaaacaatacaaatgctggcttatttcggtttgtccggtatatcgaacaattacagcaa
aatgatggtcagttgggcgaagcaccccaagaagcagacgagcaagcagtgcgtgttatg
accattcatgcctcaaaagggctagaattccccattgtatttatcccagaattcgataaa
gcctttaacaccaaggatttaaaggggaaagtcttgctgcaaaaaaatgccggtatcggg
attaattatctacagccagatgccttggtaagcatgccaactttgcaacaattggtcgtc
caacaagcactcaaacgccagagttggtcagaagaaatgcgcctgctgtatgtggctttg
acccgtgctgaacaacaattacaccttatcgggagtgcgtctgttagtgaaacgggtcaa
agcgcagcgttacaaacgttatggcaacgggctaaaaatactacgggccaatttttggga
gaagatttacgtctgacggcgaaatcttacctcgattggttaattttggctcttgcccgc
acacaagaaccaacgttggaagcttggttgggtgaaggggacaaaccacgtcttctagga
ccagaaaccacgcaaacgggtcaattgacagtgaatttaataccggaagcaaccattcat
ttaccaacggataacacgacgccaactgaggtggcaacgccgaatagtcaagattacgat
gccaaagatttccaggcggcgcaagccatgttgggctatcagtatccgaatatggcggcg
acccagacggcggcgtatcaatctgtcagtgagatgaaacgattatttgaagatcctgac
cgtaagcaaatggtctccttgacagtggcggaaaatggacagctgtccccagccaatgat
ttagtgccagaaaatttaacgttaccaacgtttatgacggatgggtcacaacaaccttca
agtgctgccattgggacggcaacgcacttaatgttgcaattgttagattttatcgtaccg
caaacacgtgagtcattggcggtgctgcgggaccaactggtggctaatggacggatgacg
caaccagtcgctgacttaattaatttagatcaaattttacaattcctagcgacaccgttt
gcacaacgggtcatgcaacatgcagcaaccttaacgcgtgaagcgacgtttgccatgatc
atgccagctaaccagatttatcaagggttggcagatccggcaccggtgttggttcacgga
attattgatggctactttattgatcatacgacccaatcaatcacgctttttgattataaa
acggattatatccgaccagatcgtatgacagaagatctggccaagttagcccaacgttat
cgcggtcagctccgtttatatcagcaagccttacaacaagaatatccaacttatactttc
catgccccacagctcgtggccttgagcgttggtcgcgtggtgagtttgggtgtacaataa
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