Leuconostoc gelidum JB7: C269_00800
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Entry
C269_00800 CDS
T02322
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lge
Leuconostoc gelidum JB7
Pathway
lge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C269_00800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lge03019
]
C269_00800
03400 DNA repair and recombination proteins [BR:
lge03400
]
C269_00800
Enzymes [BR:
lge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C269_00800
Messenger RNA biogenesis [BR:
lge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C269_00800
DNA repair and recombination proteins [BR:
lge03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C269_00800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
PSII_Pbs27
Motif
Other DBs
NCBI-ProteinID:
AFS39607
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All DBs
Position
152938..154746
Genome browser
AA seq
602 aa
AA seq
DB search
MQNLTPQTILKEKFGYDNFRTGQLDVIEKVLAHKHALAIMPTGGGKSITYQLPAMLFDGI
TLVISPLISLMKDQVDGLDAMGIDATFLNSTLSGQVQAQRMSDLRSGYYKMLYVSPERLE
ISSFFDFIQQLPIELVAIDEAHVMSQWGHDFRPSYLNILPLLAKIPGNPAVLGLTATATD
RVRQNLQQLLGVSDEDTILTGFARDNLALKIAHNVDKRQYVQEYLRENKDQSGIIYAATR
KQVDELYEFLNKKGVKAGHYHAGLPERERQTMQEAFLFDEVQVMVATNAFGMGINKPNVR
FVIHYSVPGNIEAYYQEIGRAGRDGLPAEAVLLYAPQDIHLQEFFVQKSEGTEEHKQNEY
NKIREMNAFANTQSCLPRYLLGYFGEIVDHDCGHCSNCLDAREMVDVTTDSQRVLANVVR
MNQSFGKTMVAKVLKGSQDATVKKYDYLMKLPTYGLMKDRTLKDLSSFIDYLTADGYLRI
EGGEFPVLKVTETGARVLKGKLVVEKRVNRRVIAQQKVTSAAKGLKLSESDNKLFAELKS
KRLDLAREAGIPPFLIFSDKTLMNMAILRPQTDEEFLAISGVGEKKFDIYHKDFASVIVN
QH
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatttgacacctcaaacaattttaaaagaaaaatttggctatgataattttcgt
acaggacaattagatgtgattgaaaaagtgttagcgcataagcatgcgttagctattatg
ccaactggtggtggtaaatcgattacctatcaactaccagctatgttatttgatggcatt
acgctagtgatttcgccacttatatcgttgatgaaagatcaagtcgatggacttgatgcg
atgggaattgatgcaacatttcttaattcaacattgagtggccaagtacaagcacagcgt
atgtcggatttacgatcaggctattataaaatgctatatgtatcgcccgaacgtctagag
atttcaagtttttttgattttatacaacaattacccattgaattggtggctattgatgag
gcgcatgtcatgtcacagtggggacatgattttcgtccaagttatcttaatattttacct
ttgctggctaaaatccctggaaatcctgccgttttaggattaacagcaacagctactgat
cgtgtacgtcaaaacttacagcaactacttggtgtgtcagatgaagacacgattttaact
ggttttgcgcgtgataatttggcgctgaaaattgcccacaatgttgataagcgacagtat
gtgcaagagtatttacgtgagaataaggaccaaagtgggattatttatgcagccacacgt
aaacaagttgatgaattatatgaatttttaaataaaaaaggtgttaaagcaggccattat
catgctggtttgcctgaacgtgaacgacaaacgatgcaagaagcttttttgtttgatgaa
gtacaagttatggtagccacgaatgcttttggaatggggattaacaaacctaatgtgcgg
tttgttattcactactcagtaccgggaaacattgaggcgtattatcaagagattggtcga
gctggccgtgacggcttgccggcagaagcagtattattatatgcaccacaagatattcat
ttacaagagttttttgtacaaaagtcagaaggtacagaagaacataagcaaaatgaatat
aacaaaattcgcgagatgaacgcatttgcaaatacgcaaagttgtttgccacgttactta
ctaggttattttggtgaaattgttgatcatgattgtggccattgttcaaattgtttagat
gctcgtgaaatggttgacgttactactgattcacaacgtgttttggccaatgttgtgcgt
atgaaccaaagctttgggaagacaatggtcgctaaggttttgaaaggttcacaagatgca
actgtgaagaagtatgactatttgatgaagttacccacatacggtttgatgaaagatcgg
acacttaaagatttaagtagttttattgattacttaacggcggatggctacctcagaatt
gaagggggcgagtttccagtattaaaagttactgagactggtgcacgggttctaaaagga
aaattagttgtggaaaaacgcgtcaaccgacgtgtgattgcgcaacaaaaagtcacatca
gcagctaaagggcttaaattgtccgagagtgataataaattatttgctgaattaaaatct
aagcgcttagatttagcgcgcgaagcaggtattccgccattcttgattttctcagataaa
acattaatgaatatggctattttacgcccacaaactgatgaagaattcttagcaatatca
ggtgttggtgagaaaaagttcgatatttatcataaagacttcgctagtgtcattgttaat
caacattaa
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