Leuconostoc gelidum JB7: C269_03480
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Entry
C269_03480 CDS
T02322
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lge
Leuconostoc gelidum JB7
Pathway
lge03410
Base excision repair
lge03430
Mismatch repair
lge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C269_03480
03430 Mismatch repair
C269_03480
03440 Homologous recombination
C269_03480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lge03400
]
C269_03480
DNA repair and recombination proteins [BR:
lge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C269_03480
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C269_03480
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C269_03480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
ssDNA-exonuc_C
DHHA1
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
AFS40139
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Position
727944..729908
Genome browser
AA seq
654 aa
AA seq
DB search
MSQNNWHILPQPTEKTVRQLTTKLNIDPLTATVVAQKGFITPEAAYQYLQPSIDQLHDPM
LLHDMDKAFERLTEAAFGGEKIVVYGDYDLDGMTSTAVMVEALEVLGADVTAYIPNRFKD
GYGPNIDVYKRLIAEGAQIIVTVDNGVSGHEAVAYAMSQGVDVIITDHHEMPPTLPEAYA
IVHPRHPDGHYPFDDLSGVGVAFKVAQALLTDGQSITDKSELPTEMLDLVALGEIADMVS
LTDENRTLVSWGLKQINDNPRPGLVALLKNAGQMVNQPIISETVSFKIAPRLNAVGRLGD
AQLALDLLLSQDSDEATEIASQIEAINAQRQEFVEEVFGAAKQIALSDKHANDQVLVVAG
ENWHQGILGIVASRLVELLHRPVIVLSLIDGIYKGSGRTYNNFDLYQLMGQYRSFYDTFG
GHASALGLAISPENLSALREQLAVLPTLDVPEISVAVNMMLPVSKMAIPVYEGLTLLEPF
GTGNVQPTFGVQEPTIEKAVTMGATNQHLKLTLANQIEAVGFNHPEWTTIVAHPANISFV
ATMGLNYFRGKKRLQLLLTDVSMPPIVENDAHKKFFGHVYKFIYAHQDLNFAQNLDKIAE
QLNITKNDLNIMVQVFIELGFVKVIDGGFVKVIPNAPQKTLTTSKTYHKFLANR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaacaattggcatatattaccacagccaacagaaaagacagtacgtcaactc
acaacaaaactaaatattgatccattaactgcaaccgttgtcgctcaaaaaggatttata
acccctgaagcagcctatcagtacttgcaaccaagtattgatcagttacatgatccgatg
ctactacatgacatggataaagcatttgaacggcttactgaagcagcatttggtggtgaa
aaaatagttgtttatggcgattatgatttagatggcatgacaagtaccgcggtcatggtt
gaggcgctcgaagtattaggtgctgacgtaactgcctatatacctaatcgttttaaagat
gggtatggtccaaatattgatgtttataagcgtttaatagctgaaggcgcgcaaattatt
gtcacggttgataatggtgtgagtggtcatgaagcagttgcttacgcaatgagtcaaggt
gtcgatgtgattattactgaccaccatgaaatgccgcccactttacctgaggcctatgct
attgtgcacccaagacacccagacggtcattatccattcgatgacttgtcaggtgttggt
gtggcattcaaggtggcacaagcgcttttaacagatggtcaatcaatcacagataaaagt
gaattaccaacagaaatgttggatttggtggctttaggcgaaattgccgacatggtgtca
ttaacagatgaaaatagaactttagtgtcatgggggttgaaacaaataaatgataatcca
cgtccagggttagtcgcattacttaaaaatgctgggcaaatggtgaatcaacccattatt
tcagaaacggtgtcattcaaaattgcaccacgtttgaatgctgttggtcgtttaggcgat
gctcagttagctcttgatttattgctaagtcaagattctgatgaggccactgaaattgcc
tcacaaattgaggcaatcaatgcgcaacgtcaagaatttgtagaagaagtgtttggcgct
gccaaacaaatcgcgttatcggataaacatgctaacgatcaagtgcttgttgttgcaggt
gaaaactggcatcaaggaatcctaggtatagtggcaagtcgattggttgaattattgcat
agaccagtgattgtgttgagtttaatagatggcatctacaaaggctcaggtcgcacttac
aataattttgatttgtatcaattgatgggtcaatatcgttcgttttatgatacatttggt
ggtcacgccagtgcactagggttggcaatatctccggaaaacttgtctgcattacgcgaa
caactagcagtgttaccaacccttgatgtgcctgaaatatcagtagctgttaatatgatg
ttaccggtatctaaaatggcaatacccgtctatgaaggattaactttattagaacccttt
gggacaggcaatgtgcagccaacttttggtgtacaagaaccaacaattgaaaaggctgtc
acgatgggagcaacaaaccaacatcttaagttaacacttgctaatcaaattgaagcagtt
ggttttaatcatcctgagtggacaacgattgttgctcatccagccaatatatcgtttgtc
gcaacaatgggattgaactattttcgtggtaagaaaagattacaattattgttgacagac
gtttctatgccacctatagttgaaaatgatgcacataagaaattttttggccacgtttat
aaatttatttatgcgcatcaggacttgaattttgcacaaaatttggataaaatagcagag
cagctaaatattactaaaaacgatcttaatattatggtacaagtctttattgaattagga
tttgtaaaagtgattgatggcggttttgtaaaagtgattccaaatgcaccacaaaagaca
ttgacaacgtcaaaaacttatcataaatttctagcaaaccgttaa
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