Leuconostoc gelidum JB7: C269_04940
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Entry
C269_04940 CDS
T02322
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lge
Leuconostoc gelidum JB7
Brite
KEGG Orthology (KO) [BR:
lge00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C269_04940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lge03021
]
C269_04940
Transcription machinery [BR:
lge03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C269_04940
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HeH
Ish1
Myo5a
Motif
Other DBs
NCBI-ProteinID:
AFS40429
LinkDB
All DBs
Position
complement(1020585..1021883)
Genome browser
AA seq
432 aa
AA seq
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MATILASSKISDIKDYLDEQKISYNSRAKKAELLALAQGKTPEEAAAAGKASKPKVAKKS
GIIKNPEYDKAVKALIAEYKAAKAITYADLAKRLAEPFNLDGENIERLMEKVEDSGVAIV
DEKGEPAPEVLKAKQNKPSKEELDQAQETPAGIKINDPVRMYLKEIGRVNLLKGDEEINI
AKRIEDGDIEAKQELAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYTKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPLPEEIG
AEMDLTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDNEAVSPADSAAYEMLREQL
ESVLETLTDREENVLRLRFGLEDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRHPSRS
KQLKDFMDDGNN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcaactattttagcttcaagtaaaatttcagatatcaaggactatctagatgaacaa
aaaatttcatacaatagtcgtgctaaaaaagcagaacttttagcgttagcacagggcaag
acaccagaggaggccgcagccgctggcaaagcttccaaacctaaagtagcaaaaaaatca
ggcattattaaaaatccggaatatgataaagctgttaaggcgttgattgcagaatataaa
gctgctaaagcaatcacatatgcagatttggcaaaaagattagcagaaccatttaactta
gacggtgaaaatatcgaacggttaatggaaaaagttgaagattctggtgttgcaattgtt
gatgaaaaaggtgaaccagcaccagaagtattaaaggcaaagcaaaataagccctctaaa
gaagagttagatcaagcacaagaaacgcctgccggcatcaaaataaacgatcctgttcgt
atgtatcttaaagaaattggccgtgttaatttattgaaaggtgacgaagaaattaatatt
gctaaacgcattgaagatggtgatattgaagccaaacaagaattagcagaagctaattta
cgattagttgtttctattgctaaacgatatgttggtcgtggtatgcaatttttggacttg
attcaagaaggcaacatgggtttgatgaaagccgttgataagtttgattacacaaaagga
ttcaaattttcaacctatgctacatggtggattcgtcaagcaataacacgtgctattgct
gatcaagcgcgcaccattcgtattcctgttcatatggttgaaacaattaataaattaatt
cgtattcagcgccaattgcttcaagatttgggtcgtgaaccattgccagaagaaattggg
gctgaaatggacttgacacctgataaggtacgtgaaatattaaaaattgcgcaggaacca
gtttcgcttgaaacaccgatcggtgaagaagatgattcacacttaggtgacttcattgaa
gacaatgaagcagtttcaccagctgattcagctgcatatgaaatgttacgtgaacaactt
gaatctgtgttggagacattaactgaccgcgaagaaaatgttttacgtttacgttttggt
ctggaagatggccgcacacgtacacttgaagaagtaggccgtgtatttggtgtgacaaga
gaacgtattcgtcaaattgaagcaaaagcattacgtaagctccgccatcctagtcgctct
aagcaactaaaagattttatggatgatggcaataattaa
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