Leuconostoc gelidum JB7: C269_05480
Help
Entry
C269_05480 CDS
T02322
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lge
Leuconostoc gelidum JB7
Pathway
lge03030
DNA replication
lge03430
Mismatch repair
lge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C269_05480
03430 Mismatch repair
C269_05480
03440 Homologous recombination
C269_05480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lge03032
]
C269_05480
03400 DNA repair and recombination proteins [BR:
lge03400
]
C269_05480
Enzymes [BR:
lge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C269_05480
DNA replication proteins [BR:
lge03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C269_05480
DNA repair and recombination proteins [BR:
lge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C269_05480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF835
HROB
tRNA_anti_2
DUF5572
Motif
Other DBs
NCBI-ProteinID:
AFS40533
LinkDB
All DBs
Position
complement(1123694..1127041)
Genome browser
AA seq
1115 aa
AA seq
DB search
MYAPLQILSAYSLLKNPNTIEQIIETAKKRHYQAIALTDINVMYGAVKFYQVAKENNIKP
LFGVTLQVNGLVNTATVFPIVLIAENQTGYQNLMWISSAKMTTKVSEMTLDVITGHLAGI
NVIFPNDSEISQFIASEYTQSVDYWQQLSTKIDPKKLYLGINPQLAPQIQERLVTFSEKN
QAKLIALDTVDYLNPDDAFTTQVLKAIETNTKLDDIKLLAQQVGTHVLQDFNEVQIAYLA
NDALKIAYLNNELLVSKSHVEIIFKQTATLPKFHLPNENQTSENYLRYIAEKGLLERING
RQVALDQYEKRLQHELQIINNLAFNDYFLIVWDIVNFAHQKNIQMGAGRGSAAGSLVAYA
LRITDVDPIQFGLLFERFLNPQRIQMPDIDIDWPDNKRDLILNYLHDKYGQRNFAQILTF
GTLAAKQALRDTARVFGLSQQMMSRISNAVPQGKQGRKVLIQDTLNESNVLRTVLSDVDN
GDLLLKVAQHIEGLPRNYSTHAAGVVLSSESLIKTLPVQSGSDDRLLTQFEKNPVEALGL
LKIDILGLSNLSILAQTLYDAKKQLPDHFDISKIPLDDSKTLALYAKGDTNGVFQFESSG
IKNVLRQLKPTTFEHIVAVNALYRPGPSRNIQAFIQRRHGREKVTILDSSLKTILAPTFG
IIVYQEQVMLVAETFAGFTLGEADLLRSAMSKKKIEKMTAMQEKFVQGAIDLGHDSEQAE
QIFAYIDEFANYGFNRSHAVAYSKLSFELAYMKAHYPVAFFTALLNANLGSPEKIRSYIM
EAKSRNIEVSPPNINQSQRFWTADDQKLQMGLNNIRGVRTDFVSAVLEERRENGRFKSIQ
SFIRRLPDKLRKQDTLIQLVYAGALDAFGYNRSELITALADLIEAAGFGDFILSETKIKK
SDDLTLTDKLAHEKEVIGVNLSGHPLDAYSALIISKKFEQIADMIKKDQKIKGIVIIDSV
RKTRTKKGEEMAFMTVSDITGTIGITVFSQVLTKTSDLLKAGAMIEITGKVDSYNDKLSI
IANQIHHAPDLEPLGKVSGTWFLQFDDEHDTVENRHDVVEILKKNHGDNPVVIYWQNTEQ
KQTLDAKFWMSDETVIIVELSTLLGYKNVVFRRSQ
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcacctttacagattttgagtgcttatagcttattaaaaaatcctaatacaatt
gaacagattattgaaactgccaaaaaacgtcattatcaggctattgctttaaccgatatc
aatgtgatgtatggcgctgttaaattttatcaagttgcaaaagaaaataatatcaagccg
ttatttggtgtgactttacaagttaatggcttggtcaatactgcgactgtttttccgata
gtactcatcgccgaaaatcaaacaggctatcagaatttgatgtggatttcttcagctaaa
atgactaccaaagtcagtgaaatgacactagatgttattactgggcatttggcaggtatc
aacgtcatttttcctaatgatagtgaaatttcgcagtttatcgcttctgaatatacacaa
tcagttgattattggcaacagcttagtacaaaaattgatccaaaaaaattatatttaggc
attaatccgcaattagcgccacaaattcaagaacgattagtgacatttagtgaaaagaat
caagcaaagctgattgcgttggatacggttgactatctcaatcccgatgatgcattcaca
acacaagttttaaaggcaattgagacaaataccaagctagatgatattaaattgctcgca
cagcaggttggaacccatgtattgcaagattttaatgaagttcagatagcttatttggct
aatgatgcattaaaaatagcttacttgaacaatgaattactagtatcaaagagccacgtt
gaaatcatatttaagcaaacagcaacattaccaaaatttcatttaccaaacgaaaatcag
acttcagaaaattatttgcgttatattgcagaaaaaggtttattagaacgaataaacgga
cgacaagtggctttagatcagtatgagaaacgcttgcaacacgaattgcaaatcatcaat
aatttagcgtttaacgattattttttaattgtctgggatattgttaattttgctcatcaa
aaaaatattcaaatgggtgctgggcgtgggtctgcggcaggttccttagttgcctatgct
ttgagaattactgatgtcgatccgatacagtttggcttattatttgaacgtttcttgaat
ccacaacgtatccaaatgccagatattgatattgattggccagataataaacgtgattta
atattaaactatctacatgataaatatgggcaacgtaattttgcgcaaatattgactttt
ggcactttagcagccaagcaggcattaagagatactgcccgggtgtttggtttatcccag
caaatgatgagtcgcattagtaatgctgtacctcagggtaaacaagggcgtaaagtatta
attcaagatactttaaatgagtctaatgttttgcggactgttttatctgatgttgacaat
ggggatttactacttaaagtagcacaacatattgagggactaccacgtaattactcaact
catgctgctggtgtagtattaagctcagagtcattgattaagaccttaccagtacaatca
ggatcagatgatcgattattgacacaatttgaaaaaaatccagttgaagcactaggatta
cttaaaatagatatccttggcctatccaatttatctattttagcgcaaacgttatatgat
gcaaaaaaacagttaccagatcattttgatattagtaaaataccacttgatgattcaaaa
actttggctttatatgctaagggtgatacgaacggggtctttcagtttgaatcttcaggc
attaaaaatgtgttgcgccaattaaaaccaacaacttttgaacatattgtggcggttaat
gcgctttatcgaccaggcccaagtcggaatatacaagcgtttattcagcgacgccatggt
cgcgaaaaagtcacaatacttgattcaagtcttaaaacaattttggcgccaacttttggc
attattgtctaccaagaacaagtcatgctagttgcagaaacttttgcaggcttcacctta
ggtgaagctgatcttttgcgaagtgctatgtcaaagaaaaaaatagaaaaaatgacagca
atgcaggaaaaatttgtgcaaggggcaattgatttgggtcatgatagtgaacaagctgag
cagatttttgcttatatcgatgagtttgcaaattacggctttaacagatcacatgctgtt
gcatacagtaaattatcttttgaattagcctatatgaaagcacattatccggttgctttt
tttacagcattattaaatgctaatcttggatcgcctgaaaaaatacgaagctacattatg
gaagcaaagtcacgtaatatagaagttagcccaccgaatatcaaccaatcacaacgtttt
tggacagcagatgatcaaaaattgcaaatgggtttaaataatattcgaggtgtgcgaact
gactttgtgtctgctgtattagaagaacgacgagagaatggacgttttaaatcaattcag
tcgtttattcgtcgtttgcccgataaattgcgtaagcaagacactttgatacaacttgtt
tatgctggggcgttggatgcatttggttataatcggtcagaattaataactgctttggct
gacttaattgaggcagctgggtttggtgactttattttaagtgaaacaaaaataaagaaa
agtgatgatttaacgttgactgataagttagcacatgaaaaagaagtaataggagttaat
ttatcgggacatccattagatgcttactcagcattaattatcagtaaaaaattcgaacaa
attgccgatatgataaaaaaagatcaaaaaataaaaggcatagtgattattgatagtgtt
cgtaaaacgcgtacaaaaaaaggtgaagaaatggcgttcatgactgtttctgatataacc
ggaacaattggtataacagtgtttagtcaagtgttgactaaaacaagtgatctattaaaa
gcaggggcaatgattgaaattactggaaaagtagatagttataatgacaaactatcaatt
attgcaaatcaaatacatcatgcgcccgatttagaaccattgggaaaggtatctggtact
tggtttttacaatttgatgatgaacatgatacggttgaaaatcgtcatgacgtggttgaa
atactcaaaaaaaaccatggcgataacccagttgtgatatattggcaaaatacggaacaa
aagcaaacactcgatgcaaaattttggatgagtgatgaaaccgttatcattgttgaatta
tcaactttattaggctataaaaatgttgtgtttagaagaagtcaataa
DBGET
integrated database retrieval system
