Leuconostoc gelidum JB7: C269_06145
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Entry
C269_06145 CDS
T02322
Name
(GenBank) ribonuclease J2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lge
Leuconostoc gelidum JB7
Pathway
lge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C269_06145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lge03019
]
C269_06145
Messenger RNA biogenesis [BR:
lge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C269_06145
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AFS40666
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Position
complement(1277301..1279103)
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AA seq
600 aa
AA seq
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MTDLSIIPFGGVRENGKNMYAITVNDQIFIFDAGLKYPETDQLGVDVVVPDFDYFIKNSD
KIAGVFLTHGHADAIGALPYFLQQVQAPIFGSELTVELAKLAIKDQHALEDYDDYHVVNE
KTEIDFGQVTVSFFNTTHSIPESLGIVLATPYGQVVYTGDFKFDQTANSYYSTDIARLVE
IGQGKVLALLADAAGTGNELNSVNESKISEYILETFRENNKKRIIVAAVASNIQRIQQVI
DATVATKRQLVLSGNDIENVVRTAIRLRKLNLPVPENKLFVNLKNAKNLLASETVILETG
RMGEPIKHLNRMANGEDPYVRIGEDDLVFITTTPSTAMESVVAKTRDMLFKQGADVKQIS
SDLRSSGHASRNDLQIMINVLKPEYFMPVQGEYRVMTTAKAAAEEVNIAEDHIMMAMKGD
QFKWLKDHFELQDSFTVGETLIDGAGIGDIGNVVLRDRRILSEDGIFVSVVTIDRKKRQV
VSKPKLTSRGFVYVKANRDLMKEASDLTVKQIENYLTTTKSFDWNELKNGVREVVSRYLF
EQTRRRPMVMPVVMEVNQNRRPAAHKSVQIAGQQRNRQMSKIENKQSKKQNTKPTAKTVK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacggatttaagtattattccatttggcggtgtgcgcgaaaatggtaaaaacatgtat
gcaattactgtaaatgatcaaatttttatttttgatgcaggactaaaatatccagagaca
gaccagttaggtgtcgatgtggtagtccctgattttgactattttattaaaaatagtgat
aaaattgcgggtgtttttttgacacatgggcatgctgatgcaatcggtgcgctaccatac
tttttgcaacaagtacaagcgcctatatttggttcagaattgaccgttgaattagcgaaa
ttagctatcaaagatcagcacgcacttgaagattatgatgattatcatgttgttaatgag
aaaacagaaattgatttcggacaggttacagtgtcgttttttaatacaacacattccata
ccagaatcattaggcattgttctagctacgccttatgggcaagttgtgtatactggcgat
tttaaatttgatcaaacagcaaattcgtattacagtacagacatcgcacgtttagtcgaa
ataggacaagggaaagtgctagctttattagcagatgcagctgggacaggtaatgaactg
aattctgtcaatgagtcaaaaattagtgaatatattcttgaaacctttagagaaaataat
aaaaagcgtattattgtagcggctgttgcatcaaatattcaacgtattcaacaggtcata
gatgcaactgtggcaaccaaacgacagttagttttgtctggcaacgatattgaaaatgtt
gttcgaactgcaatacgcttacgtaaattgaatttaccagtgcctgaaaataaattattt
gtcaatcttaaaaatgctaaaaacttacttgcttcagaaactgttattcttgaaacaggc
cgaatgggagagcccattaaacatttaaatcgtatggctaatggggaagatccgtatgtt
cgtattggcgaagatgatttggtatttattacaacaacgccgtcaacagctatggaaagt
gtcgtagcaaagacacgagatatgctttttaagcaaggtgcagatgttaaacaaattagt
agtgatttgcgctcaagcggtcatgcatcacgtaatgatttacaaattatgattaatgtg
ctaaaacccgaatatttcatgccagttcagggagaatatcgtgtcatgacaactgcaaaa
gctgcagctgaggaagttaatattgctgaagatcatattatgatggctatgaaaggtgat
caattcaaatggttaaaagatcattttgaattgcaagattcctttacagttggggaaact
ttgattgatggcgcaggcattggtgatattggtaatgttgttttacgtgatcgccgtatt
ttatcagaagacggtattttcgtttctgttgtaacaattgatcgaaagaaaagacaagtt
gtttctaagcctaaattgacatcacgtggttttgtttatgttaaggcaaatcgtgatttg
atgaaagaagcctctgatttaacagttaagcagatagaaaattacctcaccacgactaag
agcttcgattggaatgaacttaagaatggtgtacgagaagttgtatcgcgctacttattt
gaacaaacacgtcgtcgtccaatggttatgcctgttgtaatggaggtcaaccaaaacaga
cgaccagcagctcataaatcggtgcaaatagccggacagcaacgtaatcggcaaatgtca
aaaatagaaaataaacaatctaaaaagcaaaatactaaacctacagcaaagactgtaaag
tga
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