Leuconostoc gelidum JB7: C269_08020
Help
Entry
C269_08020 CDS
T02322
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lge
Leuconostoc gelidum JB7
Pathway
lge03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lge00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C269_08020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lge03021
]
C269_08020
03400 DNA repair and recombination proteins [BR:
lge03400
]
C269_08020
Enzymes [BR:
lge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C269_08020
Transcription machinery [BR:
lge03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C269_08020
DNA repair and recombination proteins [BR:
lge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C269_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF6384
Motif
Other DBs
NCBI-ProteinID:
AFS41039
LinkDB
All DBs
Position
complement(1670901..1674563)
Genome browser
AA seq
1220 aa
AA seq
DB search
MAIDVNKFESMQIGLASPDKIRSWSHGEVKKPETINYRTLKPEKDGLFDERIFGPTKDYE
CACGKYKRIRYKGIVCDRCGVEVTSSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLD
MSPRSLEEIIYFASYVVIEPGDAPVEKKQLMTEREYRELKREYGASFKAGMGAEAIKDLL
ASVDLAAEADQLKRELQEATGQKRVRAVRRLDIIEAFFQSKNKPEWMVMDVIPVIPPDLR
PMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPFLKMNQMGLPR
PMAIELFRPFIMKELTTRNLAGNVKSAKRKIDKADEDVMDVLEDVIKEHPVLLNRAPTLH
RLGIQAFEPVLVSGKAMRLHPLVTEAYNADFDGDQMAIHVPLSDEAQAEARLLMLAAGHI
LAPKDGKPIVAPSQDMVIGNYYLTAEEVGREGEGMIFSSVEEAQIAFANKVVHYHTRIGI
QTSSFPAAKPFTDEQRAKIMVTSVGKLIFNEILPVDFPYINEPSEDNFKGIKDTFFIEAG
EDIHDYLADTSTVSAFKKGFLSDVIAEVYKRYKVTETSLLLDRMKDLGYAKSTESGLTVS
MNDVTELPEKPAILSAAHQQVATVTKQFRRGLITDEERYQRVTEIWTKAKDVIQDKLIDL
FEPTNPIFMMQDSGARGNISNFVQLAGMRGLMAGPGGKIIELPVTANFREGLTVMEMFIS
THGARKGMSDTALKTANSGYLTRRLVDVAQDVIVREWDNNADRGVAVKAIMDGNSVVEPL
YDRILGRYAMKSVFNPENGDRIISRNEMIDEDVAKAIVAAGVEEVTIRSVFTSTTEHGVS
VLDYGRNLATGEEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGGNDITQGLPRVQE
IVEARIPKGRAEISEVTGTIVSIEENPAERTKAVTIEGETDTRTYTLPLAARMRFAEGDD
IERGAAINEGPVDPKELLAVTDTLTTESYMLTEIQKVYRLQGIEVSDKHIEVMIRQMLRK
IRVMDPGETNLLPGMLMDIADFQRANEPALFEGLVPATARPVLLGITKAALETNSFLSAA
SFQETTRVLTDAAIRGKNDPLVGLKENVIIGKIIPAGTGMAEYRKIKSKVVGNVIAQPEV
DKEATPDIPKLDDVAKTFEA
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcaattgatgttaataagttcgaaagcatgcaaattggtttggcttctcctgataag
atccgttcatggtctcatggtgaagtaaagaagccagaaacaattaactatcgaacactt
aagccagagaaagatggcttgttcgacgaacgcatcttcggaccaacaaaagattatgaa
tgcgcctgtggtaaatataagcgaatccgatataaaggaattgtttgtgatcgttgtggc
gttgaagttacatcatcaaaagttcgtcgtgaacgtatgggtcacatcgaattagctgca
cctgttacacacatttggtacttcaagggtattccatcacgtatgggtcttgttttagac
atgtcacctcgctcacttgaagaaattatctactttgcttcatatgttgtcatcgaacct
ggtgatgcacctgttgaaaagaagcaattaatgacagagcgtgaataccgtgaattgaag
cgcgaatatggtgctagttttaaggctggcatgggtgctgaggcaataaaagatttgtta
gctagtgttgatctagctgctgaagcagatcaattgaagcgcgaactgcaagaagcaaca
ggccaaaagcgcgtacgtgcggtacgacgtctggatatcattgaggcatttttccagtca
aaaaataagcctgagtggatggtcatggatgttattccagttattccaccagacttacgt
ccaatggttcaattagaaggtggtcgttttgccacatctgatttgaatgatttgtatcgt
cgtgttattaaccgtaacaaccgtttaaagcgcttgcttgatttgaatgcgccaggcatt
atcgtgcaaaacgaaaagcgtatgcttcaagaagctgttgatgcattgattgataacggt
cgtcgtggccgaccagtagctggaccaggtaaccgaccattgaaatcactttctcatatg
ttgaaggggaagcaaggccgtttccgtcaaaacttgttaggtaaacgtgtcgattattct
ggtcgttcagttattgatgttggacctttcttgaagatgaaccaaatgggattgccacgt
ccaatggcaattgaattattccgcccattcatcatgaaagaattaacaactcgcaattta
gctggcaatgtcaaatctgctaaacgtaaaattgacaaagcagatgaagatgtcatggat
gttttggaagatgtcattaaagagcacccagttcttttgaaccgtgcaccaacattacat
cgtttgggaatccaagcttttgaaccagtactagtttcaggaaaagcaatgcgtctgcac
ccattggttacagaagcatataatgctgattttgatggcgatcaaatggctattcacgta
cctttgtctgatgaagcacaagctgaagcacgtttgttaatgcttgctgctggtcatatt
ttggcacctaaagatgggaagccaattgttgcaccttcgcaagatatggttattggaaac
tactacctgacggctgaagaagttggccgtgaaggtgaaggtatgatattttcatctgta
gaagaagcacaaattgcttttgcaaataaggttgtccattatcatacacgtattggtatt
caaacatcttctttccctgcagcaaagccatttacagatgaacaacgtgccaaaattatg
gtgacttcagttggtaaattaatttttaatgaaattttgcctgttgattttccatacatt
aacgaaccttctgaagataactttaagggcattaaagatacattcttcattgaagcaggt
gaagatattcatgattatttggcagatacatcaacagtgagtgccttcaaaaaaggcttc
ttgtcagatgtcattgctgaagtttataagcgctataaagtaacagaaacatcattatta
ttggatcgcatgaaggatctggggtatgcaaagtcaacagaatctggtttgacagtgtca
atgaacgatgtgactgaattgcctgaaaaacctgctattttgtcagctgctcatcagcaa
gttgcaacagttacaaagcaattccgacgtggtttgatcacagatgaagaacgttaccaa
cgtgtgactgaaatatggaccaaagcaaaagatgttattcaagataagttgatcgatttg
tttgaaccaacaaaccctattttcatgatgcaagattcaggagcgcgtggtaacatttca
aacttcgttcaattagctggtatgcgtggattaatggctggccctggtggtaagattatt
gaattgccagttacagctaatttccgtgaaggcttgacagtgatggaaatgtttatttct
actcacggagcgcgtaaaggtatgtctgatacggctttgaagacagccaactctggttat
ttgacacgtcgacttgtcgatgttgcacaagacgttattgttcgtgaatgggataacaat
gctgatcgtggtgttgctgttaaagcaatcatggatggtaactcagttgttgaaccactt
tatgatcgtattttgggtcgttatgctatgaaatctgtctttaatccagaaaatggtgac
aggattatttcacgtaacgaaatgattgatgaagatgttgcaaaagctattgttgctgca
ggtgttgaagaagtaacaattcgttcggtctttacgtcaaccacagaacatggtgtttcc
gtacttgattatggtcgtaacttagccacaggtgaagaagttgaagtcggagaagcagtt
ggtactgttgcggcacaatcaattggtgaaccaggtacgcaattgacaatgcgtaacttc
catacgggtggtgttgccggtggtaacgatattacacaaggtttgcctcgtgtgcaagaa
attgttgaagcacgtatccctaagggacgtgctgaaatttcagaagttactggtacaatt
gtttccattgaagaaaatccagctgaacgtacaaaagctgtgacgatcgaaggcgaaaca
gatacacgtacctatactttgccattggcagcgcgtatgcgttttgctgaaggtgatgat
attgagcgtggtgctgcaattaatgaaggaccagttgatcctaaagaattgctagcagtt
acagatacattgacaacggaatcatacatgttgacggaaatccaaaaggtttatcgtttg
caaggtattgaagtttctgacaaacatatcgaagtaatgattcgtcaaatgttacgtaag
attcgtgttatggatccaggagaaacaaatcttttgccaggtatgttgatggatattgcg
gatttccaacgtgctaatgaaccagcattgttcgaaggtcttgtaccagcaactgcacgt
ccagtgttacttggtatcacgaaagctgctttggaaacgaactcattcctatctgcagca
tcattccaagagacaactcgtgtcttgacagatgcagctattcgcggaaaaaatgatccg
ttggttggtttgaaagaaaacgttattattggtaagattattcctgccggaactggtatg
gctgaatatcgcaaaattaagagcaaagtggttggtaatgttattgcacaacctgaagtc
gataaagaagcaacacctgatattcctaagttagatgatgttgctaaaacatttgaagcg
taa
DBGET
integrated database retrieval system
