Leopardus geoffroyi (Geoffroy's cat): 123575850
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Entry
123575850 CDS
T10761
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123575850 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123575850 (TRIM71)
04121 Ubiquitin system [BR:
lgf04121
]
123575850 (TRIM71)
Enzymes [BR:
lgf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123575850 (TRIM71)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123575850 (TRIM71)
Ubiquitin system [BR:
lgf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123575850 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
zf-B_box_Trim66
zf-RING_UBOX
COG5_N
Motif
Other DBs
NCBI-GeneID:
123575850
NCBI-ProteinID:
XP_045292649
LinkDB
All DBs
Position
C2:156648005..156714497
Genome browser
AA seq
881 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSGSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGGGGGGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAF
LLSNLLDAVVATADEPQPKNGRAGAPAGAGGHSNHRHHAHHAHPRAPASAPPPLPPAPPP
PAPPRSAPGAPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLT
KDHYIERGPPGPAAAAAAAAAAAAQQLGLGPPFPGAPFSILSVFPERLGFCQHHDDEVLH
LYCDTCSVPICRECTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQ
TVAEQVEMKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQS
LNKLESTISAVQQVLEEGRALDVLLARDRMLAQVQELKTVRGFLQPQEDDRVMFTPPDQA
LYLAIKSFGFVSSGAFAPLTKATGDGLKRALQGKVASFTVVGYDHDGEPRLSGGDLMSAV
VLGPDGNLFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTMCNQHIENSPFKVVVKSGRSYV
GIGLPGLSFGSEGDGDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLG
SRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVA
VNAEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFN
NHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSF
LCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccggctcgtccgcgtcgtcgtcgtcctcgcagacgtccacg
tcgtcgggcggcggcggcgggggcccgggggccgcggcgcgccgcctgcacgtcctgccc
tgcctgcacgccttctgccgcccgtgcctcgaggcgcaccggctgccggcggccggcggc
ggcggcggcggcggcggcggcgcgcccggggagcccctcaagctgcgctgccccgtgtgc
gaccagaaagtcgtgctggccgaggcggcgggcatggacgcgctgccctcgtccgccttc
ctcctcagcaacctgctcgacgccgtggtggccacggccgacgagccgcagcccaagaac
gggcgcgccggggccccggcgggcgcgggcggccacagcaaccaccggcaccacgcgcac
cacgcgcacccgcgcgcgcccgcctcggccccgccgccgctcccgcccgcgccgccgccg
cccgcgccgccccgctccgcgcccggcgccccggccgcctccccgtccgcgctgctgctg
cgccggccgcacggctgcagctcgtgcgacgagggcaacgcggcctcgtcgcgctgcctg
gactgccaggagcacctgtgcgacaactgcgtccgcgcgcaccagcgcgtgcgcctcacc
aaggaccactacatcgagcgcggcccgccgggtcccgccgccgccgccgccgccgccgcc
gccgctgccgcgcagcagctcgggctcgggccgcccttccccggcgcgcccttctccatc
ctgtccgtgtttccggagcgcctgggcttctgccagcaccacgacgacgaggtgctgcat
ctgtactgtgacacctgctcagtgcccatctgtcgcgagtgcacgatgggccggcacggc
ggccacagcttcatctacctccaggaggcgctgcaggactccagggcacttaccatccag
ctgctggccgacgcacagcagggccgccaggccatccagctgagcatcgagcaggcccag
acggtggcggaacaggtggagatgaaggccaaggtggtacagtcggaggtcaaagccgtg
actgcgcggcacaagaaggccctggaggaacgggagtgtgagctgctgtggaaggtggag
aagatccgccaggtgaaagccaagtccctgtacctgcaggtggagaagctgcgacagagc
ctcaacaagctggagagcaccatcagcgctgtgcagcaggtcctggaggaggggcgggcg
ctggacgtcctgctggcccgggaccgcatgctggcccaggtgcaggagctgaagaccgtg
cgcggcttcctgcagccccaggaggatgaccgggtcatgttcacgcccccggaccaggcc
ctgtacctggccatcaagtccttcggcttcgtcagcagcggggccttcgcgcccctcacc
aaggccacgggcgacggcctcaagagggcgctccagggcaaggtggcctcctttaccgtc
gtcggctacgaccacgacggggagcctcgcctctcggggggcgacctgatgtcggccgtg
gtcctgggccccgacggcaacctgttcggtgccgaggtgagcgaccagcagaacgggacg
tacgtggtgagctaccggccgcagctggagggcgagcacctcgtgtcggtcaccatgtgc
aaccagcacatcgagaacagccccttcaaggtggtggtcaagtcgggccgcagctacgtg
ggcatcggactcccgggcctgagcttcggcagcgagggcgacggcgacggcaagctgtgc
cgcccctggggcgtgagcgtggacaaggagggctacatcgtcgtggccgaccgcagcaac
aaccgcatccaggtgttcaagccgtgcggggccttccaccacaagttcggcaccctgggc
tcccggcccgggcagttcgaccggccagccggcgtggcctgcgacgcctcccgcaggatc
gtggtggccgacaaggacaatcatcgcattcaggtcttcacgttcgagggccagttcctg
ctcaagttcggcgagaagggaaccaagaacgggcagttcaactacccttgggacgtggcg
gtgaacgcggagggcaagatcctggtctcagacacccggaaccaccggatccagctgttc
gggcccgacggcgtcttcctgaataagtacggcttcgagggggctctctggaagcacttt
gactccccccggggcgtggccttcaaccacgagggccacttggtggtgaccgacttcaac
aaccaccggctcctggtcatccaccccgactgccagtccgcgcgcttcctgggctccgag
ggcacgggcaacgggcagttcctgcgcccgcagggtgtggccgtggaccaggaggggcgc
atcatcgtggccgactccaggaaccaccgggtgcagatgttcgagtccaacggcagcttc
ctgtgcaagtttggcgcccagggcagcggcttcgggcagatggaccgcccctccggcatc
gccgtcacccccgacgggatgatcgtggtggtggactttggcaacaatcggatcctcatc
ttctaa
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