Leopardus geoffroyi (Geoffroy's cat): 123576429
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Entry
123576429 CDS
T10761
Symbol
NID1
Name
(RefSeq) nidogen-1
KO
K06826
nidogen (entactin)
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123576429 (NID1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
123576429 (NID1)
Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
123576429 (NID1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
EGF_3
Ldl_recept_b
Thyroglobulin_1
cEGF
EGF
EGF_CA
FXa_inhibition
SGL
Vgb_lyase
EGF_MSP1_1
EGF_LRP2
hEGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
123576429
NCBI-ProteinID:
XP_045293232
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All DBs
Position
D2:12793703..12877520
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AA seq
1244 aa
AA seq
DB search
MLAAIRRSGAAWTRALLLQLLLAGPGGCLSRQELFPFGPGHGDLELEAGDDQVSPALELR
RALRFFDKSDINSVYVTTNGIIAMSEPPAKESSPGLFPPTFGVVAPFLADLDTTDGFGKV
YYREDLSPSVTRLAAECVQRGFPEISFQPSSAVVVTWESVAPYQGPSKDPAQEGKRNTFQ
AVLASSDSSSYAIFLYPEDGLQFDTTFSKKDETQVPAVVAFSQGVQGFIWKSDGAYNIFA
NDRESIGNLAKSSNSGQQGVWVFEIGSPATASGVVPSDVSLGLDDGAEYDDEDYDSVTHL
GLEDVGTTSFPYEAPRSGDPSMRSVPWVLSPRRLPTERPPGPPGPPTERTRSFQLPGERF
HQQHPQVIDVDEVEETGVVFSYNTDSRQTCANNRHQCSVHAECRDFATGFCCSCVAGYTG
NGRQCVAEGSPQRVNGKVKGRILVGNSPVPIVFENTDLHSYVVMNHGRSYTAISTIPETV
GYSLLPLAPVGGIIGWMFAVEQEGFKNGFSITGGEFTRQAEVTFVGHPGKLVIKQRFSGI
DEHGHLTITTELEGRVPQIPFGSSVHIEPYTELYHYSPGVITSSSTREYTVMEPEQDGAA
PSTIYTYQWRQTITFQECAHDTSRPALPNTQQLSVDSVFVLYNQEESILRYALSNSIGPV
KDGSPDALQNPCYIGTHGCDTNAACRPGPGVQFACECSIGFRGDGRTCSDIDECSEQPSV
CGNHAICNNHPGTFRCECVEGYQFSEEGTCVAVVDQRPINYCTTGLHDCDIPQRAQCIYM
GGSSYTCSCLPGFSGDGRACQDVDECQPSQCHPDAFCYNTPGSFTCQCKPGYRGDGFHCV
PGEMEKTRCQLEREHILGAAGAADPPRPGLFVPECDEHGHYVPTQCHGSTGYCWCVDRDG
RELEGTRTRPGMRPPCLSTVAPPIHHGPSVPTAVIPLPPGTHLLFAQTGKIERLPLEGST
MQKSEAKTLLHAPDKVIIGLAFDCVDKMVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP
EGIALDHLGRNIFWTDSHLDRIEVAKLDGTQRRVLFETDLVNPRGIVTDSVRGNLYWTDW
NRESPKIETSYMDGTNRRILVQDDLGLPNGLTFDAYSAQLCWVDAGTSRVECLKPGQPSR
RKVLEGLQYPFAVTSYGKHLYYTDWKMSSVVAVDLAISKETDTFHPHKQTRLYGVTTALS
QCPQGHNYCSVNNGGCTHLCLATPGSRTCRCPDNTLGVDCIERK
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgcgatccgccggagcggggctgcgtggacgcgggcgctgctgctgcagctg
ctcctggcggggcccgggggctgcctgagccgccaggagctctttccgttcggcccggga
cacggggacctggagctggaggctggggatgaccaagtctccccagccctggagctgagg
cgggcgctccgcttcttcgacaaatccgacatcaactcggtctacgtcaccacaaatggc
attattgccatgagtgaacccccggccaaagaatcctcccctgggctcttcccaccgacc
ttcggagtagttgcacctttcctggcggacttggacacgacagatggctttgggaaggtt
tattaccgggaagacttatccccctctgtcactcggctggcagcggagtgtgtccagaga
gggttcccagaaatctctttccagcccagtagcgcggtggttgtcacttgggaatccgtg
gccccttaccaagggcccagcaaggaccccgcccaggaaggcaagagaaacacattccag
gctgttctggcctcctccgattccagctcctacgccattttcctttatcctgaagacggt
ctgcagttcgacacgacattttcaaagaaggatgagacccaagttcccgctgtggttgca
ttcagtcaaggtgtacaaggatttatatggaagagcgatggagcttataatatatttgcc
aacgacagagaatccattggaaatttggccaagagcagtaattccgggcagcagggcgtc
tgggtgtttgagatcgggagcccggccacggccagtggtgtagtgccctctgacgtgagc
ctcggactggacgacggagcagaatatgatgatgaagattacgactcggtgacacatctg
ggcctagaggacgtgggcacgacatccttcccctatgaggctccgaggagcggagacccc
agcatgcgcagcgtgccctgggtcctctccccccgccgcctgcccaccgagaggccccct
ggacctcccggacctcctacggagaggaccagatctttccagctgccgggggagaggttt
caccagcagcacccacaggtcatagacgtggatgaagttgaggaaacaggagtggtattc
agctacaacacggattcccgccagacgtgtgccaacaacagacaccagtgctctgtgcac
gcggaatgcagggacttcgccacgggcttctgctgcagctgcgttgctggctacactggg
aacggccgacagtgtgtcgcagaaggttcccctcagcgagttaacggcaaggtgaaagga
aggattttggtggggaacagcccggtgcccattgtcttcgagaacaccgacctccactct
tatgtggtgatgaaccacgggcgctcgtacacagccatcagcaccattcccgagaccgtc
ggctattctctgcttcctctggcccctgttggaggcatcattggatggatgtttgcggtg
gaacaagaaggattcaagaatgggttcagcatcacaggaggcgagttcacccgccaggcc
gaggtgactttcgtggggcacccgggcaagctggtcatcaagcagcggttcagcggcatc
gacgagcacggacacctgaccatcaccacggagctggagggccgcgtgccgcagatcccc
ttcggttcctcggtgcacatcgagccctacacagagctctaccactactcccccggggtg
atcacatcctcctccacccgggagtacaccgtgatggagcctgagcaagatggcgctgcc
ccttccaccatctacacttaccagtggcgccagaccatcaccttccaggagtgcgcccac
gacacctcccggccggccctgcccaacacccagcagctctcagtggacagcgtgttcgtc
ctgtacaaccaggaggagagcatcttgcgctatgcgctaagcaactccatcggtcccgtg
aaggatggctcccccgatgcccttcagaatccttgctacatcggcactcacggatgcgac
accaacgcggcctgtcgccccggccccggggttcagtttgcctgcgagtgttccatcggc
ttccgaggggacgggaggacctgctccgatatcgatgaatgttcagaacagccctcggtg
tgtgggaaccacgcgatctgcaataaccaccctggaaccttccgctgcgagtgtgtggaa
ggctatcagttttcagaggaggggacgtgtgtggccgtcgtggaccagcgccccatcaac
tactgcacgacgggcctccatgactgtgacattccacaacgggcgcagtgtatctacatg
ggggggtcctcctatacctgctcctgtttgccgggcttctctggggacggccgagcctgc
caagatgtggatgaatgccagccaagccaatgtcaccccgatgccttctgctacaacact
cccggctccttcacatgtcagtgcaaacccggctatcgtggagacggcttccattgtgtg
cctggagaaatggagaaaacgcggtgccagctggagcgagaacacatcctcggggcggcg
ggggcagcggacccaccacggccaggtctgttcgtccccgagtgtgacgagcacggacac
tacgtgcccacccagtgccacggcagcaccggctactgctggtgcgtggatcgcgacggc
cgtgagctggagggcaccaggaccaggcccgggatgaggcccccctgtctgagtacagtg
gcccccccgattcaccacggaccctctgtccccactgctgtgatccctctgccacctggg
actcacttactctttgctcagaccgggaagatagagcgcctccccctggaaggaagcacc
atgcagaagtcagaagccaagacgctgcttcatgccccggataaagtcatcattggcctg
gccttcgactgtgtggacaagatggtttactggaccgacatcagtgagccttccattggg
agagccagtctgcatggcggagagccaaccaccatcattcggcaagatcttggaagccca
gaaggcattgccctcgaccatcttggccgcaacattttctggactgattctcacttggat
cgaatagaagttgcaaagctggatgggacccagcgccgggtgctgtttgagactgacttg
gtgaatcccagaggcatcgtaacggattccgtgagagggaacctttattggacagactgg
aacagagaaagccccaaaatcgaaacttcctatatggacggcacaaaccggaggattctg
gtgcaggatgatctgggcctgcccaacgggcttacattcgatgcctactcggctcagctc
tgctgggtggacgcaggcaccagtcgggtggaatgtctgaagcccgggcagccgagcaga
cggaaggttcttgaagggctccagtatccttttgctgttacgagctacgggaagcatctg
tattacacagactggaagatgagttctgtggttgctgtagatctcgccatttccaaagag
acggataccttccacccccacaagcagacccggctgtacggtgtcaccacggccctgtct
cagtgtccccaaggtcacaactactgctcggtgaacaatggtggctgcacccacctctgc
ttggccacccccggaagcaggacctgccgttgccctgacaacaccctgggagttgactgc
atcgagcggaaatga
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