Leopardus geoffroyi (Geoffroy's cat): 123576904
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Entry
123576904 CDS
T10761
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123576904 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123576904 (EXOSC1)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123576904 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123576904 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
123576904
NCBI-ProteinID:
XP_045294397
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Position
D2:complement(57035893..57056152)
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AA seq
215 aa
AA seq
DB search
MRSRLRFPPVAVMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENG
ALPVISVMRETESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDV
RATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGYSCNYLC
PGLVISKPPQTHTVLPAKHRENGLLSQLFPFPSLS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtcgacttcgtttccctcctgtggcagtcatggcgccacccgtgaggtactgc
attccgggcgaacgtctgtgtaacttggaggagggcagcccgggcagcggcacttacacg
cgacacggctacatcttttcgtcgcttgctggctgcctgacgaagagcagcgagaacgga
gcgcttcctgtcatttctgtgatgagagaaacagaatcgcaattactaccagatgtgggg
gctattgtaacctgtaaggtctctagcatcaattcgcgctttgccaaagtgcacatcctg
tatgtggggtccacaccacttaagaactcttttcgaggaactatccgcaaggaagatgtc
cgagctactgaaaaagacaaggttgagatttataagagtttccgcccaggtgacattgtc
ctagccaaagtgatctccctgggtgacgcacagtccaattaccttctgaccactgctgaa
aatgagcttggggtagtggtggcccacagtgaatcggggtacagctgcaattatctttgt
cctgggctagtcatcagcaaaccaccacagacccatacagttcttcctgccaaacacaga
gaaaatggcctcctttcccagctctttccctttcccagcctctcctaa
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