Leopardus geoffroyi (Geoffroy's cat): 123577839
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Entry
123577839 CDS
T10761
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgf04040
]
123577839 (PKD1L2)
04091 Lectins [BR:
lgf04091
]
123577839 (PKD1L2)
Ion channels [BR:
lgf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123577839 (PKD1L2)
Lectins [BR:
lgf04091
]
C-Type lectins
Others
123577839 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Ion_trans
Lectin_C
REJ
GPS
FliX
Motif
Other DBs
NCBI-GeneID:
123577839
NCBI-ProteinID:
XP_045296078
LinkDB
All DBs
Position
E2:complement(54711843..54808053)
Genome browser
AA seq
2535 aa
AA seq
DB search
MNAVGLLLLGLALRFRAAIAKPEDGSFCSKSRVAFKDSCYEFVPLSHTFYGAQSWCEGQG
GHLVFIRDEDTQKFLQKHISQDREWWIGLVGNLARNGTTEGLGTWLDTSNVSYSHWRGGQ
APPAPDTCGYIGRDASFGWVASDNCTQPSAFICEFGVGQSLACDGLNATMHCGSGEVIQI
QDAFYGRQTPHYCIQDAARPSDLEEGCGWLSVKDEVAGQCQGLQVCQVAADGTYFGDPCP
TQGSYLWVQYECQEGLQLMVSNESFTFDNVTISLTWLLSPYIGNLSCIISTGDGHTFDPY
YPPSLSSNVTHQFTVPGEFIVFAECTTSEWHVMAQKHVTIRDKTERLSVTRCSGLSTLGA
SPLCRTVFGEPLWIQVVLDGGRGVTYTVLSGNTTLAEFTTPSGLLPYNLTLDRAAQQRMG
PGMHHLEIRATSNTTSGPSRNITVSFTEPLSGLWASWASDHLELGQDLLVNVSVARGAPE
RLTFEVAGLNATFSHEEESLQGPFGIYPVAVPLEGTFLVTVTVRNAFSNLSLEIGSITVS
APSSVREPSGTNAKTKNREKGDRQVYVEPGQYVDPFTTVTLGWPDRDKDLRFQWSCGRCW
AQWSYCVERQLLRVDQGELVLPPSCLPPPSSAVTLRLATWRGRELENREEQCLYVSAPLE
LRPRVSCEENCRPGNPREDTVLRVTMGDGSPGAVFNWYLDDTSLEKAEPLPPACRLQGFW
PRALILLQSNTSTLRLNSSFLQTWGQALRIRATAVTGHAYGEDTYVIGSVSPPEVPTCTI
TPEEGTVLTSFTIFCDTSSALGPLEYCFCLESGSCLHCGSEPALQSVYLPLGKVNNDFTL
TVVIFVSNRAGDKQQAHALVKVGLGDTHVENVAFQAAVVENITTALRGERDPERLFQLAR
AVASVLDQECQGRGCRRLLNVDVRQKVREHMLGSLSAVTATLGDMRKVQGLAQVLREVTH
RSEELTPMAQREATWVLQDASEALLAASSKAPPEDQRRQAATKDLFQAVGSVLAASLRDG
PENPTGANGSQMATVPQLLDVVERVQAALLLGTLPGGLPATLAAPSISVYTNRIQPWNWR
GSCVHTAATHSATFTLPAASSLGSMEASQEPVDIRMMSFPTSPFPARSHFDVSGTVGGLC
LTSPSGHLIPVKNLSENIEILLPRLSKGHSEPTVLNLTSPEALWVNLTTDGAALGIQLHW
RPDIPLMLSLGYGYHPNETSYDAKVHLPPTAPADGLSTWILNPEDLHFGEGIYYLTVVPE
SDLELTPTRDLTVGITTFLSHCVFWDEVQGTWDNSGCQVGPRTTPSQTHCLCNHLTFFGS
TFLVMPNAIDVRQTTELFATFEDNPVVVTTVGCLCVAYVLVVIWARRKDAQDQAKVKVTV
LEDNDPFAQYHYLVTVYTGHRRGAATSSKVTVTLYGLDGESEPHHLTDPDIPVFERGGVD
VFLLSTLFPLGELRSLRLWHDNSGDRPSWYVSRVLVHDLATNRKWYFLCNSWLSIDVGDC
VLDKEFPVATEQDRKQFSHLFLMKTSTGFQDGHIWYSVFGGSARSNFTRVQRVSCCFSML
LCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGLESSLLMFPINLLIVQIFRNTRP
RVTKEQNAGKWDRGSPSLAPSLQSMEDGLLTLEVVTKDMWRLVSSLFKALKVPAPASGWE
SVTLMDINQLLALVEDVICVQNMVGQESWEEAKQREDSLTLTLGSVQAEGKPTRANWPWE
PGTSPHLSEPRSLTAWHTASARYKKAVTNTAVILAGCPLCPWAPAEALSLPCPPEQAPRP
SDPWKDNAYRRCLYLQLEHMEQELQLVGPCGRSQCQSHARALSRLQTLKGRLGGWLGTPP
QAHTSSPMASRPPRGLPWWCVLGGWLLVAATSGVAAFFTMLYGLHYGRASSLKWLISVAV
SFVESVFVTQPLKVLGFAAFFALVLKKAEDEDEPVASLPGHPSGPDPSALFRARRCSRKD
IYQPPLATDIEKMKTTHLKEQKAFAFIREILAYLGFLWMLLLVAYGQRDPSTYHFNRHLE
HSFTQGFSAVLGFQEFFTWANTTLVSNLYSHYPGFVTDGNSRLVGSAQIRQVRVRESSCS
RAPQLQASHHGCRAPYSLDVEDLSDYGEGWNASVLNNSSGLSRAWQYESQSQRRGYPFWG
KLTMYRGGGYVVSLGTDRRSTSRILQYLFDNTWLDSLTRAVFVEFTVYNANVNLFCIITL
TLETGALGTFFAHANLQSLRLYPFTDGWHPFVVAAEVIYLLFLLYYMIVQGKLMRKQRWR
YFHSKWNLLELTIILASWSALAMFVKRAVLAERDIQRYRNHGKEGISFSETAAADAALGY
IIAFLVLLSTVKLWHLLRLNPKMNMITSALRRAWGDISGFIIVILIMLLAYSIASNLIFG
WKLCSYKTLFDAAETMISLQLGIFNYEEVLDYSPVLGSFLIGSCIIFMTFVVLNLFISVI
LVAFNEEQKYDQLSEEGEIADLLLAKILGFLGIKRKREDPGSGRKQPELLSEVRPPCTCV
SCTQALSSSSTHEHL
NT seq
7608 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagtgggcttgctcctcttggggcttgctctgaggtttagggctgcaatcgct
aagccagaagatggcagcttttgctcaaagagccgagtggctttcaaagactcttgctat
gaatttgtgcctctcagccacaccttctatggtgcccagagctggtgcgaggggcaaggg
ggccatttggtctttattcgtgatgaggacacccagaagtttctgcagaagcatatctcc
caggacagggaatggtggattggacttgtaggaaacttggctcggaatggaaccacagaa
gggctggggacctggctggacacctcaaacgtgagctacagccactggcgcggagggcag
gcccctcctgcccccgacacctgtggttacatcgggagagacgcttcctttgggtgggtg
gcctcggacaactgcactcagccgtctgccttcatctgcgagtttggcgttggccagagt
ctggcttgtgacggcctcaatgccaccatgcactgtggctcaggggaggtcatccagatc
caggatgccttctacgggcgccaaactccccattactgcatccaggatgctgcgcggccc
tcagacctggaggagggatgcggctggctcagcgtcaaggacgaagtggcaggccagtgc
caggggctgcaggtgtgccaggtggccgcagatgggacctacttcggagacccgtgcccc
acccagggcagctacctgtgggtgcagtacgagtgccaggaaggcctacagctgatggtg
tccaatgagagtttcacctttgacaatgtcaccatctccctgacatggctcctctctccc
tacattggaaacctttcatgtataattagtacaggagatggccacacttttgatccctac
taccctcccagtttatccagcaacgtgacccaccagttcacagtccctggggaatttatt
gtgtttgccgagtgcacaaccagtgagtggcatgtgatggctcagaagcacgtgacaatc
cgagacaagacggaaaggctcagcgtgactcggtgctccggcctgtcgacgttgggagcc
agccctctctgccgcactgtcttcggggaacctctgtggattcaggtggtacttgatgga
ggaagaggggtgacttacactgtgctgtcgggtaatacaaccctggctgagttcaccaca
ccaagcggcctgctaccctacaatctgaccctggacagagcagcccagcaaaggatgggc
ccagggatgcaccacctggagatccgagccaccagcaacaccacttctggaccctcccgg
aacatcacagtctccttcacggagcctctatcagggctatgggcctcctgggcttctgac
cacttggagcttggacaagacctactggtcaacgtctcggtggctcgtggcgcaccggag
aggctgacctttgaagtggcaggactcaatgcaaccttctcccatgaagaagagagtctc
cagggaccatttgggatttaccctgtggcagttcctcttgaaggcacctttctggtcacg
gtgacggtgaggaatgccttctcaaacctgagtctggaaattggaagcatcactgtttca
gctccttccagtgtgcgagaaccgtctggaacaaatgccaagacaaagaatagagagaaa
ggggacaggcaggtgtacgtggagcctggccagtatgtggatcctttcaccaccgtgact
ctgggctggccagacagggacaaggatttacgtttccagtggtcatgcggacgttgctgg
gcccagtggagctactgtgttgagaggcagctgctccgtgtggaccagggggagctggtg
cttcctccgtcctgcctgccaccacccagctccgctgtcaccctgcgcctggccacctgg
aggggcagggagctggagaaccgggaggagcagtgtctctacgtgtctgcacccctggaa
ctcaggcctcgagtcagctgcgaggagaactgcagacctgggaaccccagggaagacact
gtgctcagagtcaccatgggggatggctccccaggggccgtgttcaactggtatttagat
gacacctcgctggagaaggcggagcctctcccacccgcctgcagacttcaaggattttgg
cccagggctttaatcctccttcagagcaacacgtccacgctgcggctgaacagctccttc
ctgcagacctggggccaggccctccgaatcagagccacagcagtgaccgggcatgcctat
ggggaggacacctatgtgatcggctctgtgtctccccccgaggtgcccacctgcaccatc
actccggaggagggtaccgttctgacaagcttcaccatcttctgcgacacatcctcggcc
ctgggccccctggagtactgcttctgtctggagtcaggttcttgtctacactgtggctct
gaacctgccctccagtcagtttatctgccacttggaaaagtaaacaatgacttcacgctg
acagtggtcatttttgtgtccaatcgggcaggggacaaacaacaggcccatgcactggtg
aaggtgggacttggagacacccacgttgagaatgtggcattccaggctgcagtggtggag
aacatcaccaccgctctgcgaggcgaacgggaccccgagcggctcttccagctggccagg
gccgtggcatcggtgctggaccaggagtgccaggggcggggctgcaggcggctgctgaac
gtggacgtcagacagaaggtcagagagcacatgctagggtcactgtctgcggtcaccgcc
accctgggagacatgcggaaggtgcaagggctggcccaggtcctgagagaggtgacccac
cgcagtgaggagctcacacccatggcccagcgggaggccacctgggttctgcaggatgcc
agtgaagctctgctggcagcgagctctaaggcccctcctgaggaccagaggcgccaggcg
gccaccaaggacctgtttcaggccgtgggcagtgtgctggcagcttccctgagggatgga
ccggaaaaccctaccggggccaacggcagccagatggccaccgtgccccagctgctcgat
gttgtggagcgagtgcaggctgccctcctgctggggacactgcctgggggcctcccggcc
actctggctgccccttccatctctgtgtacacgaacagaatacagccctggaactggcgg
ggctcctgtgtgcacaccgctgccactcactctgcgaccttcaccctgcccgcggcctcc
tcccttggctccatggaggccagccaggagcctgtggacatcaggatgatgagtttccca
acgagccctttcccagcccgaagtcactttgatgtcagtggaactgttggtggcctctgt
ctgaccagccccagtggacatctcatacccgtgaagaatctgtcagagaacatcgagatc
ctgctgccccggctttcaaaaggacacagtgagccaactgtgttaaacttgaccagtcct
gaagctttgtgggtgaacctgactacagatggcgcagctttggggatccagctgcactgg
aggcctgatatcccactcatgctcagcctgggctacggctaccaccccaatgagaccagc
tatgacgccaaagttcaccttccgccaacggctcctgcagatggactgtccacgtggatt
ctgaacccagaagacctgcattttggagaaggcatctactatctgactgtggtccccgag
tctgacctggagctaacccccaccagggacctcacagttggcatcaccaccttcctgtcc
cactgtgtgttctgggatgaggtccaggggacttgggacaactctgggtgccaggtgggg
ccacggaccaccccctcccagacacactgcctctgcaaccacctcaccttctttggaagc
acgttcctggtgatgcccaatgcgatcgacgtccgccagaccaccgagctctttgccacc
tttgaagataaccccgtggttgtgactaccgtgggctgcctctgcgtggcctacgtgctg
gtggtgatctgggcaaggaggaaggacgctcaggatcaggccaaggtgaaggtcacagtg
ctggaggacaacgatccctttgcccagtaccactacctggtgacagtctacactggacac
cggagaggggcagccacgtcctcgaaggtgactgtcaccctatatggcctggatggagag
agtgaaccccaccacctgacagatcctgacatcccagtttttgagcgaggaggagtagat
gtcttcttactctccaccctgttccccctgggggagctgaggagtctgcggctgtggcat
gacaactcaggggaccgtccatcctggtacgtgagccgggtgctggtgcatgacctggca
acgaaccggaagtggtatttcctctgcaactcgtggctgtccattgatgtcggagactgt
gtccttgacaaagaatttccggtggccacagagcaggacaggaaacaattcagccacctg
tttctcatgaagacctccacaggcttccaggatggacacatctggtattctgtcttcggc
ggctcagctcggagcaactttacccgcgtccagagggtgtcctgctgcttctccatgctc
ctctgcaccatgctgaccagcatcatgttctggggtgttcccaaggacccagctgagcaa
aagatggacttgggtaaaattgaattcacttggcaggaagtgatgattggactggagagc
tctctcctcatgttccccatcaacctcctgatcgttcagatctttcgaaacactcgtcct
cgggtcactaaggagcagaatgctgggaaatgggacaggggctcccccagcctggccccc
tcactgcagtccatggaggatggccttctgacacttgaagtggtgaccaaggatatgtgg
agactcgtcagctccctgtttaaagctctgaaggtgccagcacctgcctctggctgggag
tcagtgaccttgatggacatcaaccaactgttggccttggtggaagatgtcatctgtgtg
cagaacatggtaggacaggagtcctgggaggaagccaagcagagagaggactctttgaca
ctcactcttgggtctgtacaagcggaaggtaagcctacacgtgctaactggccatgggag
cctggtacctctccccatctttctgagcccaggtctctcacggcatggcacacagcaagc
gctcgatacaagaaagccgtcactaacactgctgtcattttggcaggctgtccgctctgt
ccttgggcaccagctgaggcgctttctctcccttgtcctccagaacaggcgccacgccca
agtgacccttggaaggacaatgcctacaggcggtgtctctaccttcagctggagcatatg
gagcaagagcttcagctggtggggccctgcggccgctcccagtgccagagccacgcccgg
gccctcagccggctgcagaccctgaagggccgccttgggggctggctgggcaccccaccc
caggcacacaccagctccccgatggcgagcaggcctcctcgcggcctgccctggtggtgt
gtcctggggggctggctcctggtggcggccaccagcggcgtggcggccttcttcaccatg
ctctacggcctgcactacgggcgggccagctccctcaaatggctcatctccgtggccgtc
tccttcgtggagagtgtgtttgtcacccagcctctgaaggtgctgggctttgctgccttc
ttcgcgttggttttaaagaaagcggaggatgaggacgagcccgtggcctccctcccagga
catccgtctggcccagacccctctgccttgttccgagcacgaaggtgcagcagaaaggac
atctaccagccacctttggccactgacatcgagaagatgaaaactacacacctcaaggaa
cagaaggcatttgccttcatcagagaaatcttggcatatctgggtttcctgtggatgctg
ctgctggtcgcctacgggcagagggacccgagcacctaccacttcaacagacacctcgag
cacagcttcacccaaggcttttcagccgtgctgggcttccaggagttcttcacatgggcc
aacaccaccctcgtgagcaacctgtacagtcactacccaggctttgtcactgatggcaac
tccaggctggttggcagtgcccagattcgccaagtgagggtccgggaaagctcttgctct
cgtgccccacagctgcaggcttctcatcatgggtgccgcgcaccctactccctggatgtt
gaagacctgtcagactatggggaaggctggaatgcctccgtcctcaacaacagcagtggc
ctctcccgggcttggcagtacgagagccagagccagcgccgagggtatcccttctggggc
aaactaaccatgtaccggggaggtggttacgtggtctccctggggaccgatcgcagaagc
acatcgagaattctccagtacctgtttgacaacacctggctggacagcctgaccagagcc
gtttttgtggagttcacggtctacaacgccaatgtcaatctgttctgcatcatcactctg
accctggagaccggcgccctgggaaccttctttgcacatgcgaacctgcaaagcctgcgc
ctgtaccccttcactgacggctggcaccccttcgtggtagcagcagaggtcatctacctc
ctgttccttctctactacatgattgtgcagggcaagctcatgaggaaacagaggtggcgc
tatttccatagcaagtggaatcttctggagctgaccatcatcctggccagctggagtgcc
ctggcgatgtttgtgaagagggctgtcctggcagaacgtgacatccagcgctaccggaac
catgggaaggaggggatcagtttcagtgagacagcagcagctgatgctgcccttggctac
atcattgcgttcctggtactgctgtccacagtgaagctttggcatctgctcaggttgaac
cccaaaatgaacatgatcacatctgccctgcgccgtgcttggggggacatttcaggattt
atcatcgtcatccttatcatgcttctggcttactccattgcatcaaacttaatatttggt
tggaaactctgttcctacaaaaccctctttgatgcagcagaaacaatgatcagccttcag
ctaggaatctttaactacgaggaggtcctggactacagcccagtgcttggctccttcctg
attgggtcctgcatcattttcatgacatttgtggtgctgaatctattcatctctgtcatc
ctggtggccttcaatgaggagcaaaaatatgatcagctgtcggaggaaggagagattgcc
gatttgttgctggcgaaaatactcggtttcctgggcattaaacgtaaaagagaggacccc
ggaagtggcaggaaacagcccgagttgctgtcagaggtccggcctccctgtacctgtgtc
agctgcacccaagctttaagctcttcatccacacacgaacatctatag
DBGET
integrated database retrieval system
