Leopardus geoffroyi (Geoffroy's cat): 123578283
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Entry
123578283 CDS
T10761
Symbol
SCN1B
Name
(RefSeq) sodium channel subunit beta-1
KO
K04845
voltage-gated sodium channel type I beta
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
123578283 (SCN1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgf04040
]
123578283 (SCN1B)
Ion channels [BR:
lgf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123578283 (SCN1B)
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Motif
Pfam:
V-set
ACT_ACR9_C
DUF6693
Ig_3
ig
Ig_2
DUF5326
Motif
Other DBs
NCBI-GeneID:
123578283
NCBI-ProteinID:
XP_045297189
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Position
E2:complement(18492578..18501681)
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AA seq
218 aa
AA seq
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MGTLLALVVGAALVSSAWGGCVEVDSETEAVYGMTFKILCISCKRRSETTAETFTEWTFR
QKGTEEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNVTYNHSGDYE
CHVYRLLFFENYEHNTSVVKKIHLEVVDKANRDMASIVSEIMMYVLIVVLTIWLVAEMVY
CYKKIAAATEAAAQENASEYLAITSESKENCTGVQVAE
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggggacactgctggccttggtggtcggcgcggcgctggtgtcctcagcctgggggggc
tgtgtggaggtggactcggagacggaggccgtgtacgggatgaccttcaaaatcctgtgc
atctcctgcaagcgccgcagcgagaccaccgccgagaccttcaccgaatggaccttccgc
cagaagggcacggaggagtttgtcaagatcctgcgctatgagaacgaggtgctgcagctg
gaggaggacgagcgtttcgagggccgcgtggtgtggaacggcagccggggcaccaaggac
ctgcaggacctgtccatcttcatcaccaacgtcacctacaaccactcgggcgactacgag
tgccacgtctaccggctgctcttcttcgagaactacgagcacaacaccagcgtcgtcaaa
aagatccaccttgaggtggtggacaaagccaacagagacatggcatccatcgtgtcggag
atcatgatgtatgtgctcatcgtggtgttgaccatatggctcgtggcagagatggtttat
tgctacaagaagatcgccgcggccacggaggctgctgcacaagagaatgcctcggaatac
ctggccatcacctcagaaagcaaagagaactgtacgggcgtccaggtggccgaatag
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