Leopardus geoffroyi (Geoffroy's cat): 123578689
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Entry
123578689 CDS
T10761
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
123578689 (SHANK1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
123578689
NCBI-ProteinID:
XP_045297663
LinkDB
All DBs
Position
E2:7539180..7585557
Genome browser
AA seq
2189 aa
AA seq
DB search
MTHSPASSEDEERHSASECPEGGSESDSSPDGPSRGPRGTRGQGSGAPGSLASTRGLQSR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFAAPGTSSSGAPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPRSLMDGIGPGSDYII
KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMG
DFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPP
PAISLRSKSMTSELEEMVSPWKKKSEYEQQPPPVPSMEKKRTVYQMALNKLDEILAAAQQ
TISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSI
GAAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRG
GPFNPSSGGPLPSSSPASFDGPSPPDTRVGGREKSLYHSGPLPPAHHHPPHHHHHHAPPP
QPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPGPTPGAPSPSHHGGGG
GGIGSSQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPS
PTSPASPQPPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEAAGGG
GGGGGGGGGGAGGAGGGSSAPSPAPAMSPVPPSPSPVPTPSSPSGPATLDFTSQFGAALV
GAARREGGWQNEARRRSTLFLSTDAGDEDGGDGGLGPGAPPGPRLRHSKSIDEGMFSAEP
YLRLESAGAGSGVGYGGYGAGGRAYAGSGGSSAFTSFLPPRPLVHPLTGKALDPASPLGL
ALAARERALKESSEGGGPPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDP
ARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPAPHPGVSK
AWRSGAPEEPERLPLHVRFLENCQPRAGGAGGRGPPSEDGPGVPPPSPRRSVPPSPTSPR
GGEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDP
PTPTTPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGAPVAPGDPPPPGPPAPAA
PAPPAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGGG
GGGGAGVASGPELLDTYVAYLDGQAFGGSGAPGPPYPPQLMTPSKLRGRALGTSGGLRPG
PSGGLRDPVTPTSPTVSVTGAGTDGLLALSGCTGPSSAGMAGGPVAIEPEGPPVPLPSAS
SLPRKLLPWEEGPGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGAL
PWARGGSGGSGDSHHGGASYVPERTSSLQRQRLSEDSQPSLLSKPVSSLFQNWPKPPLPP
LPTGTGVSPSAAAAPGATSPSASSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVS
PAPRPSSLPILPSGPLYPGLFDIRGSPTGGAGGSADPFAPVFVPPHPGMSGGLGGALSGA
SRSLSPTRLLSLPPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPAL
TKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccagcagaggcccccgggggacc
cggggccagggcagcggggcacccggtagtctggcctccacccgaggcctccagagccgc
tccatgtctgtcccggacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgtctccgcttcaaccctgatgccaccatctggacagccaag
caacaggtgctctgcgccctgagcgagagcctgcaggacgtgctcaactacggtctgttc
cagccggccacctccggccgcgatgccaactttctggaggaggagcggctgcttcgagag
tacccccagtcttttgagaagggggtgccctacctggagttccgatacaagacccgggtt
tacaaacagaccaacctggatgagaagcagctggccaaattgcacacgaagacggggttg
aagaagttcctggaatacgtgcagctcgggacgtccgacaaggtggcaaggctgctggac
aaggggctggaccccaattatcacgactcggattcgggagagacccccctgacgctggca
gcccagaccgaaggctccgtagaggtgattcgaaccctgtgcctgggaggggcccacatc
gacttccgggcccgggatggcatgaccgcgctgcacaaggccgcgtgtgcccgtcactgc
ctggctctcacggcactcctggaccttgggggctcccccaactacaaggaccgccgaggc
ctgacccctctgttccatacggctatggtggggggcgacccccgctgctgcgagctgctc
ctgtacaacagggcccagctgggcatagctgatgagaacggctggcaggagattcaccag
gcctgccagcgaggccactctcagcacctggaacacctgctcttctatggggctgagccg
ggagcccagaatgcctcggggaacacggccttgcacatctgcgccctctacaataaggag
acctgtgctaggatcctcctctatcgaggagctaacaaggatgtgaagaataacaatgga
cagacccccttccaggtggctgtgatcgctggcaattttgaactgggggagctgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtacgcagcccggcga
cggggacccccaggcgcagggctgacggtgcccccggcactgcttcgggccaacagtgat
accagcatggccctgcctgactggatggtgtttgccgccccggggacctcgtcctctggg
gcccccggccctacctcagggccccagggccagtcgcagccctcggcccccagcaccaag
ctcagcagtgggaccctccgaagtgccagcagcccccggggcgcccgggcccgctcccca
tcccgcgggaggcaccctgaagaggccaagaggcagccccgtggacggcccagctccagc
gggacgcccagggaagggccggccgggggcacagggggctcagggggccctgggggctcc
ctgggcagccgcgggaggcgcaggaagctctactcggcggtacccggacgctccttcatg
gccgtgaagtcataccaggcccaagcggagggggagatctccctgagcaagggcgagaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcgtt
ggctggttcccctctgactgcctggaagaggtggcaaaccgctcccaggagggaaagcaa
gaaagccgcagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagaagcttgatggatgggattggcccagggagcgattacatcatt
aaggagaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccgg
ggggccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcgctg
cagtatctggagtccgtggatgagggtggcgtggcatggcgagctggactgcggatggga
gacttcctcatcgaggtgaacgggcagaatgtggtgaaggtcggccaccgacaggtggtg
aacatgatccgccaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcac
ccggacatggatgaggctgtccataagaaagcaccccagcaggctaagcggctcccgccc
ccagccatctctcttcgttccaagtccatgacctcagagctggaggagatggtctccccc
tggaagaagaagagtgagtacgagcagcagcctccgccggtgcccagcatggagaaaaag
cggaccgtgtatcagatggctctcaacaaactggatgaaattttggcggcagctcagcag
accatcagtgcaagcgagagtcctggacctggtggccttgcgtcgctgggcaaacaccgg
cccaaaggcttctttgccaccgagtcaagcttcgatccgcaccaccgctcccagccaagt
tatgaacgtccttcttacctgcctccaggacccgggcttatgctccggcaaaaatctatc
ggggctgcagaagatgatagaccctacctagcacccccagccatgaagttcagccgcagc
ctgtctgtgcctggctcggaggacatccctccgccgcccaccacgtccccaccggagccc
ccctacagcacacctccggccccctcctcctctggccgcctcaccccatcccccagagga
gggcccttcaaccccagttcggggggccccctcccctcctcttcccctgcgtccttcgat
gggccctcccctcccgacacgcgtgtagggggccgtgagaagagcctgtaccacagcggg
cccctgccccccgcccaccaccacccgccccaccaccaccaccatcacgccccgcccccc
cagcctcaccaccaccacgcccacccccctcatcccccggagatggagacgggcggctct
cccgacgaccccccaccgcgactggccctggggccccagcccagcctgcgcggctggcgg
ggtggcgggcccggccccaccccgggggccccgtccccgtcgcaccacggcggcgggggc
gggggcatcggctcctcccaggccccggccctgcgctacttccagctgcccccccgggcg
gccagcgcggccatgtacgtgccagcccgctcgggccgcgggcgcaaggggcccctggtc
aagcagaccaaggtcgaaggcgagccccagaagggcggcggcctcccgcccgccccctcg
cccacgtccccggcgtccccgcagccgccgcccgccgcggccgcgccctcagagaagaac
tccatccccatccccaccatcatcatcaaggctccgtccaccagtagcagcggccgaagc
agccagggcagcagcaccgaggcggagcccccgacccagcccgaggccgcgggcggcggc
ggcggcggcggcggcggcgggggcggcggggccggcggggccggcgggggctcctcggcg
cccagccccgccccggccatgtcgccggtgccgccgtcgccctcgccggtgcccaccccc
agctcgcccagcggcccggccaccctcgacttcaccagccagttcggagcggccctggtg
ggcgcggcgcggagggaaggcggctggcagaacgaagcccgccggcggtccacgctcttc
ctctccaccgacgcgggggacgaggacggcggcgacggcgggctgggccccggggcgccc
ccgggcccccggctgcgccactccaaatccatcgacgagggcatgttctccgccgagccc
tacctccggctggagtccgccggcgcggggagcggcgtcgggtacgggggctacggggcc
gggggccgagcctacgcgggcagcgggggcagcagcgccttcaccagcttcctgccgccc
cgacccctggtccacccgctgaccggcaaggccctggacccagcctccccgctcgggctg
gccctggccgcccgagagcgggcgctgaaggagtcctcggagggcggcgggcccccgcag
ccccctccaaggcccccatcgccccgctacgaggcgccgccgcccaccccgcaccaccac
tcgccccacgcccaccacgagccggtgctgcgtctctggggggcctcaccgccggacccc
gcccgccgggagctggggtaccgggcagggctgggcagccaggagaagtcccttccggcc
agccctccagcggcccgacgctccttgctgcaccgcttgccccccacagctcccggggtc
gggcccctcctcctgcagctggggcccgagcccccggccccgcaccccggggtgagcaag
gcgtggaggtcgggggcccccgaggagccggaacggctgcccctccacgtgcggttcctc
gagaactgccagcccagagccggcggcgcgggcggaagggggcccccctcggaggacggg
ccgggggttccgcctcccagcccgcgccggtccgtaccgccctcgcccacctccccgcgg
ggcggcgaagagaacgggctccccctgctggtcctgccgccccccgctccctcggtggac
gtggaagacggcgaattcctctttgtggaaccgctgcccccgcctctggagttctccaac
agcttcgagaagccagagtcgccgctcacacccgggcctccccacccgctgccggacccc
cccaccccaaccaccccgttgccccccgtgccgccgcccgccgtggccgccgcgcctccc
accctggactccacggcgtccagcctgacttcctatgacagcgaggtggccacactgacc
cagggggcccccgtggctcccggggacccccctccgccaggcccgccggccccggccgcc
ccggctcccccggccccacagcctggccccgacccgccgcccggcacggattctggtatc
gaggaggtggacagtcggagcagcagtgaccacccgctggagaccatcagcagcgcgtcc
acactgagcagcctttctgccgaaggcggtggcagcgccggaggcggcggcggcggcggc
ggcggcggcggggccggtgtggccagtgggccggagctcctggacacgtatgtggcctac
ctggacggccaggccttcggggggagtggtgctcccgggccaccgtaccccccgcagctc
atgactccttccaagctccggggccgggctctggggaccagcggaggcctgcggcctggc
cctagtgggggactccgggaccctgtcactcccaccagccccactgtctccgtgacgggg
gctggaacggatgggctgctggccctgagcggttgcacaggaccctcatcggcgggtatg
gccgggggtccggtggctatagagccagaaggcccacccgtgcccttgccatcagcctcc
tctctgcctcggaagctgctgccctgggaggagggcccgggcccaccgccaccacccctg
cccgggcccttggcccagcctcaggcctcagccttggccacagtaaaagccagcatcatc
agtgaactcagctccaagcttcagcaatttgggggctcctcggcagctggtggcgctctg
ccctgggcccggggaggcagcgggggaagcggggacagccaccacgggggagccagctac
gtccccgagaggacctcttccctgcagcggcagagactctccgaagactcccagccctcg
ctcctctccaaacccgtcagcagcctgtttcagaactggcccaaaccacctctgccgcca
ctccccacgggaactggggtctccccttccgccgctgcagctccgggggccacgtcaccc
tcagcctcctcctccacgtccacccgccacctccagggcgtggagttcgagatgcggccg
cctctgctccgccgggcccccagcccctcactgctgcccgcctcggagcacaaggtcagc
cctgcgcccaggccctcgtccctgcccatcctgccttctggacccttgtacccgggcctc
tttgacatccgtggctccccaaccggaggggcaggaggctccgctgaccctttcgccccc
gtctttgtgccaccacaccccgggatgtccggggggcttggtggagccttgtcaggggcc
tcccgctccctctcaccaacccgcctgctttcgctgcccccggacaagcccttcggcgct
aaacctctggggttctggaccaagttcgacgtggctgattggctcgagtggctgggcttg
gctgagcaccgagcacagttcctggaccacgagatcgatggctcccatctgcccgccctg
accaaggaggattacgtcgacctgggcgtgaccagggtgggccaccgcatgaacatcgac
cgggctctcaaatttttcctggagaggtga
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