Leopardus geoffroyi (Geoffroy's cat): 123578693
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Entry
123578693 CDS
T10761
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04514
Cell adhesion molecule (CAM) interaction
lgf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
123578693 (LRRC4B)
04517 IgSF CAM signaling
123578693 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lgf04515
]
123578693 (LRRC4B)
Cell adhesion molecules [BR:
lgf04515
]
Immunoglobulin superfamily
NGL family
123578693 (LRRC4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
DUF7617
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
123578693
NCBI-ProteinID:
XP_045297678
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All DBs
Position
E2:7625185..7686421
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AA seq
719 aa
AA seq
DB search
MACARSSPCPPLPPGRMSWPHGALLFLWLFSPPLGAGGGGVAMTLAAGGGSPPATSCPAA
CSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKN
LVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR
VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNR
LDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL
HRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFT
CYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGT
LNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGGAGGGGGGGGGGPGGGGG
GGGGGGGGGYTYFTTVTVETLETQPGEETLQPRGTEKEPPGPTTDGVWGGGRPGDAAGPA
SSSTTAPAPRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLV
AFYKLRKQHQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGGGVGGDSHLALPA
LERDHLNHHHYVAAAFKAHYSGNPSGGGCGGKGPPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcgcccgcagctccccgtgccccccactgccgcccggtaggatgtcctggccc
catggggccctgctctttctctggctcttctccccacccctgggggccggcgggggcggc
gtggccatgacattggccgccggagggggctccccgccggccacctcctgccccgcggcc
tgctcctgcagcaaccaggccagccgggtgatctgcacgcggagagagctggccgaggtc
cccgccagcatccctgtcaacacgcggtacctgaacctgcaggagaatggcatccaggtg
atccggaccgacacgttcaagcacctgcggcacctggagatcctgcagctgagcaagaac
ctggtgcgcaagatcgaggtgggcgccttcaacgggctgcccagcctcaacacgctggag
ctgttcgacaaccggctcacgacggtgcccacgcaggccttcgagtacctgtccaagctg
cgggagctctggctgcgcaacaaccccatcgagagcatcccctcgtacgccttcaaccgc
gtgccctccctgcggcgcctcgacctgggcgagctcaagcggctggagtacatctcggag
gcggccttcgagggcctggtcaacctgcgctacctcaacctgggcatgtgcaatctcaag
gacatccccaacctgacggccctggtgcgcctggaggagctcgagctgtccggcaaccgg
ctggacctgatccgcccgggctccttccagggcctcaccagcctgcgcaagctgtggctc
atgcacgcccaggtggccaccatcgagcgcaacgccttcgacgacctcaagtcgctggag
gagctcaacctgtcccacaacaacctgatgtcgctgccccacgacctcttcacgcccctg
caccgcctggagcgcgtccacctcaaccataacccgtggcactgcaactgcgacgtgctg
tggctgagctggtggctcaaggagacggtgcccagcaacacgacgtgctgcgcccgctgc
cacgcgcccgccggcctcaagggccgctacatcggcgagctggaccagtcgcacttcacc
tgctacgcgcccgtcatcgtggagccgcccacggacctcaacgtcaccgagggcatggcc
gccgagctcaagtgtcgcacgggcacctccatgacgtccgtcaactggctgacgcccaac
ggcaccctcatgacgcacggctcgtaccgcgtgcgcatctccgtcctgcacgacggcacg
ctcaacttcaccaacgtcaccgtgcaggacacgggccagtacacgtgcatggtgacgaac
tcggccggcaacaccacggcctcggccacgctcaacgtctcggccgtcgaccccgtggcg
gccggcggtgccggcggcggcggcggcggcgggggcggcggcccgggaggcggcggcggc
ggcggcggcggagggggcgggggcggctacacctacttcaccaccgtgaccgtggagacc
ctggagacgcagcccggagaggagaccctgcagccgcgggggacggagaaggagccgccg
gggcccacgacggacggcgtctggggcgggggccggcccggggacgccgccggcccggcc
tcgtcgtccaccacggcgcccgccccgcgctcctcgcggcccacggagaaggcgttcacc
gtgcccatcacggacgtgacggagaacgccctcaaggacctggacgacgtcatgaagacc
accaagatcatcatcggctgcttcgtggccatcacgttcatggccgccgtgatgctcgtg
gccttctacaagctgcggaagcagcaccagctccacaagcaccacgggcccacgcgcacc
gtggagatcatcaacgtggaggacgagctgcccgcggcctcggccgtgtccgtggccgcc
gccgccgccgtggccgggggcgggggcgtcggcggggacagccacctggccctgcccgcc
ctggagcgcgaccacctgaaccaccaccactacgtggcggccgccttcaaggcgcactac
agcggcaaccccagcggcgggggctgcgggggcaagggccccccggggctcaactccatc
cacgaacctctactcttcaagagcggctccaaggaaaatgtgcaagagacgcagatctga
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