Leopardus geoffroyi (Geoffroy's cat): 123578876
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Entry
123578876 CDS
T10761
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
123578876 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123578876 (CIC)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123578876 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
123578876
NCBI-ProteinID:
XP_045298153
LinkDB
All DBs
Position
E2:13276734..13303371
Genome browser
AA seq
2521 aa
AA seq
DB search
MKPMKKACAGLPGSGSGGKSPPATRAKALRRRGAGEGDKPEEEDDEAQQQQQPPGPEEAE
EGEEEESERGPGAEGLLPELHPDDSAAPGPAEDPKVEGEASRWEPSLSRKTATFKSRAPK
KKYVEEHGAGSGSIGAAGAPEERARTPEEAGTLGVPPRPPTSTRSSSTDTASEHSADLED
EPAEACGPGPWPPSGTSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGD
RALTFYEGAPGGGVDVVLDATPPPGALAVGTAVCTCVEPGVAAYREGVVVEVATKPASYK
VRLSPGPNSHPGPPATLPQPPQLPHREPEEAVWVARSSLRLLRPPWEPEALPRKPPAGPE
EEQAEPGGTLPPCPAALDPKQPEDAEVSKISFGGNLGACEEGEEKHPPALGTPALLPLPP
PQLLSPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPLTAAQ
QKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADS
GPGGAGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECE
AAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAV
RSRHLSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTEL
LPHPGALGAPGAGGGGATPDFPKSDNLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQ
PSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVGTAGEARAAG
PGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAF
HPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQP
DPSVQPSEAQQPASHPVASNQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPGPG
PPHTLGVVEPGKGLPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKR
RTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRT
VSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLA
GGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSGSCGAERLHTVGGPGS
ARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGTKPSTQYGTPGPFSASGEGGA
LAASGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKE
RVTDSESGDSSGEDPEGSKGFGRKVFSPVIRSSFTHCRPSLDPEPPGPPDPPAAFGKGYG
PTPSSSSSSPASSSASAATSFPLGSGTFKAQESGQGSTAGPLRPPLPGAGGPVTPSKATR
FLSTDPATFRRKRPESVGGLEPPGPSVIAAPPAGGGSVLQTLVLPPNKEEREGSGGRMPS
APAPSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPSDTAGART
EPVTGSRAPGSSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPG
YGAPAPPAVQFIAQGAPGSGAATGSGAGAGSGPNGPVPLGILQPGALGKAGGITQVQYIL
PTLPQQLQVAPAPAPAPGTKAAAPGGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPIL
QSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPF
SVPVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLSGPTSQPQKVLLPSSTRITYVQS
AGGHALPLGTSPTSSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQV
GVSPVPSPQLPPTCTAPGGPVITAFYPGSPAPTSSAPLAQPSQAPPGLVYTVATSTTPPA
ATILPKGPPAPATATPAPTSPFPNATAGSMTYSLVAPKAQRPTPKAPQKVKAAIASIPVG
SFEAGAPGRSGPASRQPLEPGPAREPPVPESELEGQPTTPAPPPPPETWAPTARSSPPPP
PPAEERTGTKGPETMASKFPSSSSDWRVPGLGLESRGEPPTPPSPAPAPAPAPSSSSSSS
EGSSGRAAGDTPERKEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRP
EEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTP
KSAKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSA
QATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPTGTAAAP
VPTPSPAGGPDPTSPGSDSGTASAAPPLPPPPEPGPGQPGWEGPPQPSPPPPGPSTAATG
R
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggcatgtgccggcctcccaggttctggcagtggtggcaagtcc
ccaccagccacccgggccaaggccctgagacggcgaggggccggggagggcgacaagcca
gaggaggaagacgatgaggcacagcagcagcagcagcctccggggccagaagaggctgag
gagggtgaggaggaggagtctgagcggggccccggggctgaggggctgctcccggagctg
catcctgacgactcagcagccccaggcccagccgaggaccccaaggtagagggggaggca
agccgctgggagccctcgctcagccgtaagacggccacgttcaagtctcgagcgcccaag
aagaagtatgtggaggagcatggagctggcagtggtagcattggggcggctggggcccct
gaagagcgggcacggacccctgaggaggccggcaccctgggtgtacctccacggccaccc
acctccacccgttcctcttccaccgacacggccagcgagcactcagctgatctggaggat
gagccagccgaagcctgtgggccaggtccctggcccccaagtggaaccagtggtggatat
gacctgcggcagctgaggtcccagcgggtgctggctcggcgtggagatggcctcttcctg
ccggccgtggtgcgccaggtgcgccgaagccaggacctaggggtacagttccctggcgac
cgggccctgacgttctacgagggggcacctggcggcggtgtagatgtggtcttggatgcc
acgccgccgccgggcgccctggcggtgggcacggccgtgtgtacctgtgtggagcctggt
gtggctgcctaccgtgaaggtgtggtggtggaagtggccaccaagccagcttcctacaag
gtccgcctcagccctggccccaactcccatccgggcccaccagccaccctgccacagccc
ccacagctgccacaccgtgagcccgaggaggccgtgtgggtggcccgctccagcctccgc
ctgctgcggcccccctgggaacccgaggccctgccgaggaagccccccgcgggccccgag
gaggagcaggctgagccagggggtaccctgccaccctgccctgctgccctggaccccaag
cagcctgaggatgctgaggtctctaagatcagctttggtggcaacctgggggcttgtgag
gagggcgaggagaagcacccgccagccctgggcactccggccctgctcccactgcccccg
ccccagctcctgtcaccgccacccaagtcaccggcttttgcaggcccaggccgccctggg
gagcagccctcgccctgccaggagggaagccagggcggcagccgtagcagcagcgtggcc
tctctggagaagggggctgcgccagccgcccgggcccgcacaccgttgacagctgcccag
cagaagtacaagaagggcgacgtggtctgcacacccaacggaatccgcaagaaattcaat
ggcaagcagtggcggcggctgtgctctcgagacggctgcatgaaggagtcgcagcggcgg
ggctactgctcgcgccacctgtccatgcgaaccaaggagatggagggcctggcggacagt
ggcccaggtggggctgggcggccggcaggcgtggcagcacgcgagggcagcaccgagttt
gactggggtgacgaaacatcgcgggacagtgaggccagcagtgtggcggcccgtggggac
tcacgcccacgcctggtggctcctgctgacctgtcgcgctttgagttcgatgagtgtgag
gcggctgtgatgcttgtgtccttgggtagctcccgctcgggcacaccctccttctctcca
gtctctacacagtcgcccttctcacctgccccatcaccctccccttcaccgctctttggc
ttccgccctgccaacttcagccccatcaacgcctcaccggtcatccaacgcactgctgtt
cgcagccgccacctaagtgccagcaccccgaaggcaggagtgctgacgccaccagacctg
ggcccccaccccccaccgcccgcccccagagagcgccattcttctggcatcctacccacc
ttccagaccaacctgaccttcaccgtgcccatcagccctgggcggaggaagacagagctg
ctgccccacccgggggcactgggggcccctggcgcagggggtggaggagccaccccagac
ttccccaagagcgacaacctagactctggtgtggactcggtgtctcacacacctacaccc
tccacaccggctggcttccgggctgtgtcacccgccgtgcccttttcccgctcccgccag
ccctcgccattgctgctgttgcccccacctgccggcctgacctcggatcctgggccttct
gtgcgcagggttcctgccgtgcagcgggactcacccgtcatcgttcgcaaccccgacgtg
ccgctgccctccaaatttccaggggaggtgggcactgctggtgaggctcgggcagcggga
cctgggcggggttgccgagagaccccagtgccccctggggtggccagtgggaagcctggc
ctgcccccgcctctgccagcccccgtgcccatcaccgtgcctccagccgcgccgactgct
gtggcccagccgatgcccacctttggcctggcttcttcacccttccagccggtggccttc
cacccctcacctgctgccctattgcccgtcctggtgcccagcagctacaccagccatcct
gcccccaaaaaggaagtcatcatgggccggcctgggacagtgtggacaaacgtggaacct
cgctctgttgctgtgttcccctggcactccttagtccccttcctggcccccagccagccc
gacccctctgtgcaaccaagtgaggcccagcaacctgccagccacccagtggcctccaac
cagagcaaagaacctgctgagtcggcggctgttgctcacgagcagccaccaggtgggaca
gggaatgctgatcctgggcggccacctggagccacgtgccctgagagcccagggcctgga
cccccccacactttgggggtggtggaacctggaaagggtctccctcccaccactgaggag
gaggcccctggccctccaggagagccccggctggacagtgagacggagagcgaccatgat
gatgccttcctctccatcatgtctcctgagatccagttgcccctgccacccgggaaacgc
cggacccagtctctcagtgccctgccaaaggaacgagactcctcttcggagaaggatgga
cgcagccccaacaagcgggagaaggaccatattcggcggcccatgaatgccttcatgatc
ttcagcaagcggcaccgggccctggtccaccagcgtcaccccaaccaggacaaccggacc
gtcagcaagatcctgggcgagtggtggtacgccctggggcccaaggagaagcagaagtac
catgacctggccttccaggtgaaagaggcccactttaaggctcacccggactggaagtgg
tgcaacaaggacaggaagaagtccagctcagaggccaagcccaccagcctggggctggca
ggagggcacaaagagactcgggagcggagcatgtcagagacggggactgccgctgcccct
ggagtgtcctcggagctcctgtccgttgcagcccagacactcttgagctcggataccaag
gctccagggagtggctcgtgtggggctgagcgtctgcacacagtggggggacctggctcg
gcccggccccgagccttctcccacagtggggtccacagcctggatggtggggaagtagat
agccaggcgctacaggaactgactcagatggtgtctggccctgcatcctattctggtaca
aagccttccacccaatatgggactccaggccccttctcggcctccggtgagggaggtgcc
ctggcggccagtgggcgacccccgctgctgcccacccgggcttcccgttcccagcgtgct
gccagcgaggacatgaccagtgatgaggaacgcatggtcatttgtgaggaggagggagat
gatgatgtcattgctgacgatggcttcggcaccactgacattgacctcaagtgcaaggag
cgagtgaccgacagcgagagcggagacagttctggggaggacccagagggcagcaagggc
tttggccggaaggtgttctcgcctgtgattcgttcttcctttacccactgccgcccatcg
ctggaccctgagcccccagggcccccggatccacctgcagcctttggcaaaggctatggg
cccaccccatcctcctcctcgtcctcacctgcctcctcctcagcctcagctgccacctcc
ttcccactgggctcagggaccttcaaggcccaggagtcaggtcagggcagcacagcaggc
ccactgcggcccccactccctggggcagggggcccagtaacaccatccaaggctacccgg
ttcctctcaacggatcctgccaccttccggcgcaagagacctgaaagtgtggggggcctg
gagccaccaggcccctcggtcattgcagcacctcctgcggggggaggaagtgtcctgcag
acactggtcctgcccccgaataaggaggaacgggaaggcagtggaggccgcatgccctca
gccccagccccatcactggcctatggggccccagcagcccccctgtcccgcccagctgcc
accatggtcaccaacgtggtgcggcctgtcagtagcactcctgtgcccatcgcctctaag
ccctttcccacctctggccgggctgaggcatctccaagtgacacagcaggtgccaggact
gagccagtcactgggtcccgagcacctgggagctcccctctgggtgtaagcttagtgtat
tcggacaagaagtcggcagcagccacctcgccagccccgcatctggtggctgggccccta
ctgggcactgtggggaaggctcctgccacagtcaccaacctgctcgtgggcacacctggt
tatggggccccggcgccccctgctgttcagttcatagcccagggggcccctggcagtggg
gccgctacaggctcaggagcaggtgctgggagtggtcccaatgggccagtgcccctgggc
atcctgcagccaggtgccttgggcaaagctgggggaatcacccaggtgcagtacatcctg
cccacgctgccccagcagcttcaggtggctcctgccccggcaccagcccctgggactaag
gcagcagctcctggcggccccgcacccaccaccagcatccgtttcaccctcccgccgggc
acctcaaccaacggcaaagttctggctgccaccgcacccactcctggcatccccatcctg
cagtcagtaccctccgccccaccccccaaagcccagtcagtctctcctgtgcaggccccg
cccccgggtggctccgcccagctgctacccgggaaggtactggtgcccctggcggcccct
agcatgtccgtgcggggtggcggggctggccagccactgcccctggtgagcccgcctttc
tcagtacctgtgcagaatggtgcccagccacccagcaagatcatccagctgactccagtg
cccgtgagcacacccagcggcctggtgccgcccctcagcccagccacgctctccggaccc
acctcacagcctcagaaggtcctgctgccctcctctaccagaatcacctacgtgcagtcg
gcgggtgggcacgcgttgcccctgggcaccagccctacgtccagccaggctggaacagtc
acctcgtatgggcccacgagctcggtagccctaggcttcacctcactggggcccagcgga
cccgccttcgtgcagcccctgctttcaggccaagccccactgctggctcccggccaggtg
ggcgtgtcacctgtgcccagcccccagctgccgcccacctgcacagcccccggaggtcct
gtcatcacagcattttaccctggcagccctgcacccacctcctcagcacccctggcccag
ccatcccaggcgcccccgggcctggtctacactgtggctactagcaccaccccacctgct
gccaccatcctgcccaagggcccaccggcccctgccactgccaccccggcccctaccagt
ccttttcctaatgccacagcaggctccatgacctacagcttagtggcccctaaggcccag
cggcctacccccaaggccccccagaaagtgaaggcggccatcgccagcattcctgtgggt
tcctttgaggcaggtgcccctgggcggtcaggccctgcatcccggcagcctttggagcct
ggcccagcccgtgagccccctgtccccgagtctgagcttgagggtcagcccacaacgcca
gcccctccaccgcccccagagacctgggctcccacagcccggagcagccccccaccaccc
ccgcctgctgaggagcggacaggcaccaagggcccggagaccatggccagcaaattcccc
agctcatcttcagactggcgagtccctgggctaggcctggagagccgtggggagcctccc
acccctcccagcccggccccagctccggccccagcccccagtagcagcagcagcagcagc
gagggcagcagtgggagggcagctggggacacccccgagcgcaaggaggcggctggtacc
ggcaagaaggtgaaggtgcggcccccgcccctgaagaagacctttgactctgtggacaac
agggtcctgtcagaggtggacttcgaagagcgctttgctgagctgcctgagttccggcct
gaggaggtgctgccttcgcctaccctgcagtctctggccacctccccccgggccatcctg
ggctcctaccgcaagaagaggaagaactccacagacctggactcggcccccgaggacccc
acctcgcccaagcgcaagatgaggagacgctccagttgcagctcagagcccaacacccct
aagagtgccaagtgcgagggggacatcttcacctttgaccgtacaggtacggaagccgag
gatgtgctcggggagctggaatacgagaaggtgccatactcctcactgcggcgcaccctg
gaccagcgccgggccctggtcatgcagctcttccaggaccatggcttcttcccatcggcc
caggccacggcagccttccaggcacgctacgcagacatcttcccctccaaggtctgtctg
cagttgaagatccgagaggtgcgccagaagatcatgcaggcggccactcccacggagcag
ccccctggagctgaggcccccctccccggaccaccccccactggcactgctgctgcccct
gtccccactcccagccccgctgggggccccgaccccacctcacctggctcggactctggc
acagcttcggctgccccgccactgcctccacccccagagccaggtcctggacagcctggc
tgggagggccccccccagccctcccccccaccccctggcccctccacagctgccacaggc
aggtga
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