Leopardus geoffroyi (Geoffroy's cat): 123579054
Help
Entry
123579054 CDS
T10761
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123579054 (TDRD12)
Enzymes [BR:
lgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
123579054 (TDRD12)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123579054 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
123579054
NCBI-ProteinID:
XP_045298505
LinkDB
All DBs
Position
E2:complement(20266350..20338464)
Genome browser
AA seq
1308 aa
AA seq
DB search
MLEVLVLKIEDPGCFWVIIKGCSPFLDHEVDYQKLNSAMNDFYNSMCQDIEIKPLMLEEG
QVCVVYCQELKCWCRAVIKSLVSLADHHLAECFLVDFAKYIPVKSKNIRVAVETFMQLPY
RAKKFRLYCTKPVTLHIDFCEDSAEIVPAKKWDSAAIQYFQNILKATTQVEAKLCAVEED
TFEVYLYVTIKNEKVCVNDDLVAKNFARYISPKENKNLHSVEKPRLNRKSASFSSKLNPA
LTLWPMFLQGKDSQGMENSHGLTFLAQSLQHPWPKGVVGDLGPTAVILDKSVKCNMDSLR
GSPKKKSEMKQQRISLKDINKCAESSAYWPTKRGITIYAEPDTPAASTLCQKPSKKPLRL
AEKKEHNEKNGCVKLLQFLNPDPLRTDGISDLQKLQKLRSGSPQPFAVLRNKIEPCLSVD
TSPLSADLKKALQRNKFPGPSHTESYSWPPIARGCDVVVISHCGNDPLLYLPPLLTILQT
GGCYKSLPSRNGPLAVIVCPGWKKAQFIFELLGDYGMSPRPLHPVLLTIGLHKDEAKNMK
LPRACDIIVTTPHSLLRLLQYQSLLFLRLCHLILDEVEVLFFEANEEMFAILDNFKKNID
VEERESAPHQIVAVGVHWSRHIEQLMKEFMNDPYVVVTAMEEAALYGSVQQVVHLCLECE
KTSTLLQTLDFIPSQAQKTLIFTGSVAETEIVCKVVESSSIFCLKMHKETVFNLKSVLEQ
WKKKLSSGSHVVLALTDDCIPLLTITDATCVIHFSFPSSPKIFGGRLYCMSDHFQSPTEQ
GSPAEQRDKKTKSVLLLTERNACHAVGVLRYLERADAKIPVELYEFTAGVLEAKEDKKAR
RPLCPYLKSFGFCKDKRICPDRHHINPEIDMPRKLSNQTLPTFGYIKIIPFYILNATHYF
GRIVDKHVDLYATLNAEMNEYFKGNSNNTAVEKVEKFGLYGLAEKTLFHRVEVLEMSQKA
DSWGPDSVLVKFIDEGRTGLVTRHQLLPLPENFHALPPQAVEFIVCRVKPADNEVEWNPK
ITRYIHHKIIGKLHDAKVILALGNTVWVDPMVHVTKLSNLKTSVIDYNVRAEILSMGMGI
DNSEHTECLKTLQEGAKTPPGEESLSQAPAPSSAEDAACLQSARQEDRGSGGGADSETKP
ESQKHETLPENTRDSSLNKTTEPLQSFHPQIRWFQKDDVVILKIRIRNVKDYNCKYFRDR
VVFSAWAGEKFYVADMELQANIVRDGCKCTITDEEPVITLAKERKEPWGSLLKQRNPNVA
FDFDHWDEREEEESPFPKVVNCKNLPSKVAEVAESSDGTSEDDGSESE
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtgctggtgctgaagattgaagatccgggatgcttctgggttattataaaa
ggatgtagtccctttttagatcatgaagttgattatcaaaaactaaatagtgccatgaat
gacttctataatagcatgtgtcaagatatagaaataaagccgttaatgttggaagagggg
caggtgtgtgtggtttactgccaggaactgaagtgctggtgcagggctgtcattaagtca
ctggtgtctttggcggaccatcacctggcggagtgcttcctggtggactttgccaagtac
atcccagtgaaatctaaaaacatccgagttgcagtagaaacttttatgcagcttccctac
cgagcgaaaaaattcagactgtactgcacgaaacctgttacgttacacattgacttctgc
gaagatagcgctgaaattgtacctgccaagaagtgggacagtgcagctattcagtacttt
cagaacatcctgaaagcaactacccaggtggaagccaaattgtgcgccgtggaagaagat
acttttgaggtctacctttacgtaaccataaaaaatgagaaagtctgtgttaatgatgat
ctggttgcgaagaactttgctcgttacatatcacccaaggagaataaaaaccttcattct
gtagagaaaccacgattgaatagaaagtctgcatccttttccagtaaactcaatccagca
cttactctttggccaatgtttttgcaaggaaaagattctcagggaatggaaaattcacat
ggtttaacttttctggctcagtctcttcagcatccatggcccaagggtgttgttggtgac
cttgggccaactgctgtgatcctggataaaagtgtaaaatgtaatatggattcattgaga
ggttcacctaaaaaaaaatctgaaatgaaacaacagcgcatctctttgaaagatataaat
aagtgtgctgaatcttcagcgtactggccaacgaagaggggaataaccatatacgctgag
ccagatacaccggcagcaagcactttatgtcagaagccaagtaagaagccactcaggttg
gccgagaagaaagaacacaatgagaagaatggctgtgtgaaattactgcagtttttaaat
cctgatcctttgagaactgatggaatctctgatcttcagaagctgcagaagcttcggtcg
gggtccccgcagccgtttgctgtgctccggaacaagatcgagccttgcttgtcggttgac
acgtcgccactttcggctgacctgaaaaaggctctccaaagaaacaagtttccgggacct
agccacactgaatcctactcttggcctcccatagcgaggggctgtgacgtggtggtcatt
tctcactgcggaaatgaccctctgctgtacctcccgccactccttacgattctgcaaacg
gggggctgctacaagtctttgccgagcagaaacggacctctggcagtcatcgtgtgccct
gggtggaaaaaggcccagtttatttttgaattactgggggactatggcatgtcccccagg
cctcttcacccagtgctgttaacaatcggactccacaaagatgaagccaaaaacatgaag
cttccaagggcttgtgatataattgtgacgacaccgcacagcctcctgagacttctccag
tatcagagcttgttatttctcagactctgtcacctcattttggatgaggtggaagtatta
ttctttgaagctaatgaagaaatgttcgctatattagataactttaaaaaaaacattgac
gttgaagaaagggaatctgcaccacatcagattgttgccgttggagttcattggagcaga
catatagaacagttgatgaaagagttcatgaatgacccctacgttgtggtcacggccatg
gaagaggctgctctctatggcagcgtccagcaggtagtgcacctttgcctggaatgtgaa
aaaacctctactttactccagactctagatttcattccaagtcaagcacaaaagaccttg
atcttcaccggttctgtagctgaaacagaaatcgtgtgtaaggtagtagaaagcagttca
atattttgcttgaaaatgcataaagaaacggtttttaatttaaaaagtgttttagaacag
tggaagaagaagttaagttctggctctcacgttgtattagccttaactgacgactgcata
ccgctcttgaccatcactgatgccacgtgtgtgattcacttcagcttcccttcctcacca
aagatttttggtgggcgtctgtattgcatgtctgaccattttcagagtccaaccgagcag
ggttctcctgcagaacagagagataagaaaaccaaatctgtcttgctgctgacggagaga
aatgcgtgccacgcggtcggggtcctgcgctacctggagcgagccgatgccaagattccc
gtggagctgtatgagtttactgcgggggttctggaagccaaagaagataagaaagcccga
aggcctctttgtccgtatcttaagtcttttggtttttgcaaagacaaaaggatctgtcct
gatcgacaccatattaatccagaaatagacatgccaaggaaattatccaaccaaactcta
ccaacatttggatacatcaaaataatacccttttatattttgaatgcaacgcattacttt
ggccgtatagttgataagcacgtggatctttatgcaacccttaatgctgaaatgaacgag
tattttaagggtaacagcaataacacagctgttgaaaaggtggaaaaatttggattatat
ggattagcagaaaaaacactttttcacagggttgaggtgttggagatgagccaaaaagca
gacagctggggcccggacagcgtcctcgtcaagtttatagacgaaggccggactggactc
gtcacgagacaccaattgctgcctctcccagaaaatttccacgctctgcccccgcaggcg
gtggagttcattgtttgcagagtgaaacccgctgacaacgaagttgaatggaacccaaag
atcactaggtacattcatcataaaatcattgggaaattgcatgatgcgaaagtgatactg
gctttaggaaacacagtgtgggtcgacccaatggtgcacgttacaaaactgtcaaatctg
aaaacttctgtcattgattataacgttcgtgctgaaattctgtcaatgggaatgggcatt
gacaactcagagcatacggaatgcctgaagacgttacaggaaggagctaaaacaccaccc
ggtgaagaaagcttaagccaagccccggcgccttcttcagcagaagatgctgcttgtctg
cagagcgcgcggcaagaggacaggggctcgggaggaggtgctgactccgagacaaagcca
gaaagccaaaagcacgaaactctacctgaaaacacgagagactcttctcttaacaaaacc
acagaacctctgcaaagcttccacccacaaatcagatggttccaaaaagacgacgtggtc
atactgaagataagaataaggaacgtaaaggattacaactgtaaatatttcagagataga
gtcgtgttcagtgcctgggcgggagagaaattttacgtggccgatatggagctgcaggcc
aacatagtaagagacggctgcaaatgcacgattacagacgaggaacctgtcatcactctc
gcgaaggagagaaaggagccttggggcagcttactcaaacagaggaatcctaatgtggct
ttcgatttcgatcactgggacgaacgtgaagaagaggagagccccttccccaaggttgtg
aattgtaaaaacctgccctcgaaggtggcagaggtggctgagagcagtgacgggacatcg
gaggatgacggaagtgagagtgaatga
DBGET
integrated database retrieval system
