Leopardus geoffroyi (Geoffroy's cat): 123579087
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Entry
123579087 CDS
T10761
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123579087 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgf04131
]
123579087 (VPS35)
Membrane trafficking [BR:
lgf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
123579087 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
CENP-O
FerA
Motif
Other DBs
NCBI-GeneID:
123579087
NCBI-ProteinID:
XP_045298580
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All DBs
Position
E2:complement(24935935..24972686)
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AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPIEDPD
PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcacctcaggatgagcaggaaaagctcttggatgaagccatc
caggctgtgaaggtccagtcattccagatgaagagatgcctggacaaaaacaagcttatg
gatgctctgaaacatgcttctaatatgcttggtgaactccggacttctatgttatcacca
aagagctactatgaactttatatggctatttctgatgaactacactatttggaggtctac
ctgacagatgaatttgctaaaggaagaaaagtggcagatctctatgaacttgtacagtat
gctggaaacattatcccaagactttatctattgatcacagttggagttgtatatgtcaaa
tcgtttcctcagtccaggaaagatattttgaaagatttggtagaaatgtgtcgtggtgtg
caacatcccttgagaggtttatttcttcggaactatcttcttcagtgtaccagaaatatc
ttacctgatgagggagagccaacagatgaagaaacgactggtgatatcagtgattccatg
gattttgtactactcaactttgcagagatgaacaagctctgggtgcgaatgcaacatcag
ggacatagccgagatagggaaaaaagagaacgagaaagacaagaactcagaattttagtg
ggaacaaatttggtgcgcctcagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgttttgactgggatattggaacaagttgtgaattgtagggatgctttggctcaagaa
tatctcatggagtgtattattcaggttttccctgatgaattccaccttcaaactttgaat
ccttttctccgggcctgtgctgagttacaccaaaatgtaaatgtgaaaaacataatcatt
gctttaattgataggttagctttatttgctcaccgtgaagatggacctggaatcccagca
gatattaaactttttgacatattttcacagcaggtggctacagtaatacagtctagacaa
gacatgccttctgaggacgttgtgtctttacaagtctctctcattaatcttgctatgaag
tgttaccctgatcgtgtggactatgttgataaagttctagaaaccacagtggagatattt
aataagctcaaccttgaacatattgctaccagtagtgcagtttcaaaggagctcaccaga
cttttgaagatacctgttgacacttacaacaatattttaacagtcttgaaattaaaacat
tttcacccactttttgagtattttgactatgagtccagaaagagtatgagttgttatgtg
cttagtaatgttctggattataacacagaaattgtctctcaagaccaggtggattccata
atgaatttggtgtccacattgattcaggatcagccagatcagcccatagaagaccctgat
ccagaagactttgctgatgagcagagccttgtgggcagattcattcatcttctacggtct
gaggaccctgaccagcagtacttgattttaaacacggcacgaaaacattttggagctggt
ggaaatcaacggattcgcttcacactgccacctttggtatttgcagcttaccagctggcg
tttcgctacaaagagaattctaaagtggatgacaaatgggaaaaaaaatgccagaagatt
ttttcatttgctcaccagactatcagtgctttgatcaaagcagagctggcagaattaccc
ttaagactttttcttcaaggggctctagctgctggagaaattggttttgaaaatcacgaa
acagtagcatatgaatttatgtcccaggcattttctctgtatgaagatgaaatcagtgat
tccaaagcacagcttgctgccatcaccttgatcattggtacttttgagaggatgaagtgc
ttcagtgaagagaatcatgaacctttgaggactcagtgtgcacttgctgcatccaaactt
ctgaagaaaccagatcagggccgagctgtgagcacctgtgcacatctcttctggtctggc
agaaacacagacaaaaatggggaagagcttcatggaggcaagagggtaatggaatgctta
aagaaagctctgaaaatagcaaatcagtgcatggacccctctttacaagtgcaacttttt
atagaaattctgaacagatatatctatttttatgaaaaggaaaatgatgcggtcacaatt
caggttttgaaccagcttatccaaaagatacgagaagacctcccaaatcttgagtccagt
gaagaaacagagcagattaacaaacattttcataacacactggagcatttgcgtttgagg
cgggagtcaccagaatctgaggggccaatttatgaaggtctcatcctttaa
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