Leopardus geoffroyi (Geoffroy's cat): 123579151
Help
Entry
123579151 CDS
T10761
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123579151 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
123579151
NCBI-ProteinID:
XP_045298712
LinkDB
All DBs
Position
E2:30883337..31119014
Genome browser
AA seq
2902 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKITDYEQLNQFDSMKFHQVNQPFGSPAEHVLSPHSQFNCSPIHPPNQPNGLFPDVAD
GSPMWGHQTATSISNQNGSPFHQQGHSHPMHPNKSFVVHHDFALFQASEQQTQCTSLRSQ
QNRNSLNPGQNSLSQSKNFMDVNVSGPHRVSVSHPSQITNASTSQQSLSMQQFSQTSNPS
VHFLKCSNHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQSSAVLAPNHT
NQALSDFTGSNSFSPHRGIKQDSTQHMLNPNTSLNSSNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFNDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQF
DEATFGQDHSSHVLDHDLERQFTSHLVTRPSEMAQTQLHSPARSWHSSLSNHQHLHDRNR
LYLQRQPPSSKKSDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTKIGKLI
ITLGKKQKRKNESSDEISDTEQMPRHTLKEEDPQKRRSNRQIKRKKYAEDVEGKQSEEEL
KGSMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRITKKEVSPGVMIDTEEFFV
KYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLD
RPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDS
QGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFD
ADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYK
PAPAIFKDDMEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTNKN
RQIQQIQPTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFD
PDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITE
ERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHG
VSRTDYHILRDPELSFMAAQRNYSQSKMAPSRTSTPLLQQYQVALSASPLTSLPRLLDAK
GIILEDMKVKSENLKEEPQSSEEESMSSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKG
ETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSESDSDSERSSCSSRSSSSSSSSSSCS
DSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVPKRAEGTPHVKAYD
EESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVL
KGKWPSARRSYDANTVASFYTTKLLDSPGAATEYSEPSVPTPPGAGVKEEHDQSTQMSKV
KKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRPFDSEDSALGQQQYLARLRELQSASETS
LATFPKSVPVSGTSIQSTLGANGVRLDNQPIVKKRRGRRKNVEGVDILFFNRNKPPNHVT
VGLTSSQISTGINPALSYTQPQGMPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEH
PGYVEDLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAF
APPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKS
GIAKATAAATATTASGVSGNPLSANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPA
GLSSGGEAKNVAAMFPMLLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDPKELEGKKER
TESQNSENGGENSVSSSPSTSSTAALNTAAAANPLALNPLLLSNILYPGMLLTPGLNLHI
PTLSQSNTFDVQKNKNSDLGSSKSIEVKEEDSRVRDQEDKGGTEPSPLNENSTDEGSEKA
DASSGSDSTSSSSEDSDSSNED
NT seq
8709 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacagccaggacctgtttcactagtcgatgaattgaac
ctgggtgcagaatttgaacctttgcacatagactcactcaaccatgttcaaggtactcca
acacatcagaagataactgattatgagcagttaaatcagtttgattcaatgaaatttcac
caggtcaatcagccttttggtagcccagctgaacacgtgttatctccacactctcagttt
aattgttctccaatccatcccccaaaccaacccaatggtttgtttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctaccagcatttcaaatcaaaatgggtctcct
ttccaccaacaaggacattctcaccctatgcatccaaataaaagctttgtggtacaccat
gactttgccttatttcaggccagtgaacaacaaacacagtgcacttccttacgctcacag
caaaacagaaacagtcttaacccagggcaaaattctcttagccagtctaaaaattttatg
gatgttaatgtttctggtccacacagagtcagtgttagccacccatcacaaattacgaat
gcatctacgtcgcaacagtctctttcaatgcagcaattttctcaaacatcaaatccttca
gtacacttcctcaagtgtagcaatcaccaagaagggaattttaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagt
aatcacgtctcacccaacagtcttctgcagtcctctgctgttcttgcacctaatcataca
aatcaggctttatcagattttactggaagtaactccttttcacctcataggggaatcaag
caagactccactcagcatatgctaaatcccaatacatcgttgaattcaagtaatttccaa
atgttgcattcatcacatcctcagggtaattatagcaattcaaaattatctcctgtgcac
atgaacttcccagatcctgttgactcaggaactcaaatgggccatttcaatgatcacgta
gaaactaatggcttttcatctttagaagagaatttacttcatcaagtagagtctcaaacc
gagccattcacgggacttgacccagaagacctcctgcaggagggtctccttccccagttt
gatgaggcaacatttggacaggatcattcaagtcatgttttagatcatgaccttgaacgg
cagtttacttcacatctggtaactcggccttcagagatggctcaaactcagttgcacagt
ccagctcgcagttggcattcatcactttcgaatcatcagcatttacatgacagaaatcgc
ctatatttacagcgacagcctccatcttccaagaagagtgacggttctgggacatacact
aagttgcagaatacccaggtgaggatcatgtctgagaagaaacagagaaaaaaggtggaa
tcagaaagcaagcaagaaaaggctaatcggataatatcagaggccatagcaaaagcaaag
gagcgtggggaacgcaatattccacgagtaatgagtcctgagaactttcctagtgcttca
gttgaaggaaaagaggaaaagaaaggtagacggatgaaatccaagccaaaggacaaagag
agcaaaaaaacaaaaacttgttcaaagttgaaagagaagacaaaaattggcaaactcatt
attacgttgggtaagaaacaaaaaagaaagaatgagtcttcagatgaaatatctgataca
gagcagatgccacggcacacactcaaagaggaagaccctcaaaaaagaagatcaaatcgt
caaattaaaagaaaaaaatatgcggaagatgtagaagggaaacaatctgaagaagagctc
aaaggttctatgaaaataaaaaagaattcagctcctttacctggtgaacagcctttacag
ttatttgtggagaatccaagtgaagaagatgctgcaatcgtggataaaatcctgtcttct
agaattacaaaaaaggaagtatcacctggagtgatgattgatacagaagaattttttgta
aaatacaagaattactcctatcttcactgtgagtgggccacagaacagcagcttttgaaa
gataaaaggatccagcagaaaatcaaacgattcaaactgagacaagcacaaagagcacat
ttctttgcagacatggaagaggaaccatttaacccagactacgttgaagtagacagagtg
ttagaagtctctttttgtgaagataaagacactggtgagcctgttatttactacttagta
aagtggtgctcattaccgtatgaagatagtacttgggaactaaaagaagatgtagatctt
gcaaaaatagaagagtttgaacagttacaagcttcaaggcctgacacaagacatttggat
cgtcctcccgctaatatttggaaaaaaattgatcaatccagggactataaaaatggcaat
caactcagggaatatcaactggaaggactcaactggctcttattcaattggtacaataga
cgaaactgcattttagctgatgaaatgggtcttggcaaaaccattcagtcaattacattc
ctctacgaaatccttctgactgggataagaggacctttcctgattatcgctccactttct
actattgcaaactgggagagagaattccgtacatggactgatattaatgttgtggtttac
catgggagcctgattagcagacagatgatacagcaatatgagatgtacttcagggactca
caggggcgtatcattcgaggagcttacagattccaagccatcatcaccacttttgaaatg
attcttggtggctgtggagagctaaatgcaattgaatggcgatgtgtgattattgatgaa
gcacataggttaaagaataaaaattgtaaacttcttgaaggtctgaaactcatgaacctg
gaacacaaggtgcttttgactggtacacctctccaaaatacagttgaagaactattcagt
cttcttcacttcctagaacctttaaggtttccttccgaatcaacatttatgcaagaattt
ggggatctgaaaacagaagaacaggtgcaaaaacttcaggctatcctgaaacccatgatg
ttgaggcgattgaaagaagatgtggagaagaagctggcaccaaaggaagaaaccatcatt
gaagtggaacttactaacattcaaaagaaatactaccgggctattttggagaagaacttc
tcctttttatccaaaggggcagggcagaccaatgtacctaacttggtcaataccatgatg
gagctcaggaagtgctgcaatcatccgtatcttatcaaaggtgctgaagagaaaatactt
ggagaatttagggatacgtataatccagctgcttctgattttcatcttcaagcaatgatc
cagtctgctggtaaactggtccttattgataaattgcttcccaaaatgaaagctggaggt
cataaagtgctcatcttctctcagatggtacgctgccttgacatcctagaggactatctc
attcataaaagatatttatatgagcgaattgatggaagagtcagagggaacctgcgacaa
gctgctatagatcgatttagtaaacctgattcagatcgatttgttttccttctgtgcacc
cgagctggtgggttgggcatcaacttaactgctgctgatacatgtataatttttgattct
gattggaaccctcagaatgacctgcaggcccaagctcgttgccacagaatcggtcagaat
aaagcagttaaagtctaccgactagtaactcgtaactcctatgagagagagatgtttgac
cgagccagtctgaaactgggtctagataaggctgtgttacagagcatgagcggaagagaa
agtaatgttggtggtattcaacagctttccaaaaaggaaatagaagatctgcttcgaaga
ggtgcatatggtgctattatggaggaagaagatgaaggctctaaattctgtgaggaggat
atcgatcagattttactacgtcgtacaaaaactatcacaattgagtcagaaggacgtggg
tcaacatttgccaaggcaagttttgtggcatctggaaatcggacagatatttccttagat
gatcctaacttctggcagaaatgggctaaaaaggcagaaatagatatagatgccatcagt
ggcagaaacagcttggttattgacactccaagaattaggaagcaaacaagaccctttagt
gccacaaaagatgagttggcggaattatctgaagctgaaagtgaaggggatgaaaagccc
aaactccggagaccctgtgatcgttccaatggctatggaagaactgaatgctttagagta
gagaaaaatcttctagtttatggatggggccgatggagagagattctgtctcatggtcgt
tttaaaaggcagctgaatgagcatgatgtagaaataatttgccgagccctcttagcttat
tgccttgttcactaccgaggcgatgagaaaattaaaggcttcatatgggatctcattact
ccaactgaagatgggcagacacgagagctacaaaatcatctgggcctgtcagccccagta
cccaggggtcgaaaagggaagaaagtaaagactcaaacaagctcatttgatatacagaaa
gcagaatggcttcgaaaatataatcctgagcagctacttcaagatgaaggatacaaaaaa
catataaaacaccactgtaataaggttttgcttcgtgtaagaatgctgtattatctaaag
caagaagtcattggaaatgagtgtcagaaagtatttgatggagttgatgcaagtgacatt
gatgtttgggtcccagaaccagaccactcagaagttcctgctgaatggtgggattttgac
gctgataagtcccttcttattggagtttttaaacatggttatgaaaaatataacactatc
cgagcagacccagcattatgcttcttggaaagagtgggaaagcctgatgagaaagcagtt
gctgcagaacagagggcaaatgattatatggatggggatgtggaagatccagaatacaaa
cctgccccagctatctttaaagatgatatggaggatgatgtttcttcaccaggagatctt
gttatagcagatggagatggtcagctgatggagggtgataaaatttattggccaactcaa
tcagctttaaccacacgtttgaggcgtctcatcactgcatatcagcgtactaataaaaac
agacaaatccaacagatacagcccacgttctcagtgcctgccagtgtcatgcagcctctt
tatgaagaagccactcttaatcctaaaatggcagccaagatagaaagacagcagagatgg
acaagaagagaagaagctgacttttatagagttgtgtccacatttggagtggtatttgat
cctgacagaggccaatttgactggacaaaatttagagctatggctaggctgcataagaaa
actgatgatagtttggagaagtatttgtatgcattcatgtctatgtgtcggagggtttgt
cgtcttccttccaaagaagaattggtggatccaaatatctttatccagccaatcacagaa
gaacgtgcttcaaggactttgtatcgcattgaacttctaaggaaagtacgggaacaggcc
ctccgacatccacaattgtttgaacgcttgaagctttgccatccaaatccagacctacca
gtctggtgggaatgtggccctcatgatagggacttgctcattggagctgcgaaacatggg
gtgagccgaacagactatcacattcttcgtgatcctgaactctcctttatggcagctcaa
aggaactacagtcaaagtaagatggctccttcaaggacttctaccccacttttacagcaa
tatcaagtagcactttctgcttctcctcttacctctctacctaggctcctagatgctaaa
ggtattattctagaggatatgaaagttaaaagtgaaaatcttaaagaggagcctcagtct
tctgaagaagaatctatgtcttctgaggaaaccaggacactaataaagtctgagcctgta
agtccaaagaatggtgttttaccacaggccactggagaccagaaatctggtggaaaaggt
gaaacagacagacgcatggttgcagccagaacagaacccctaactccaaacccagcttct
aagaaacagcgagtccacaaaagaggatccgaatctagttctgagtctgactctgattct
gagagatcatcctgttcttccagatcatcttcttcctcgtcttcctcctcctcttgttcc
gactctcgatcaggctctagttcctcttcatcctcctcctgttcttcagcatcgtcttca
tcctcatcctcatcctcttcctcatcatcctcctcctcatcttcatcagaagaaagtgac
agtgaagaagaagaagtcccaaagcgagcagaaggtacccctcacgtgaaagcctacgat
gaagaaagtgttgcgtcactgagcactacccaggatgagacccaagatagcttccagatg
aacaatgggacaccagagtccgcttatatcttacaaggaggatacatgctagcagcctca
tattggccaaaggatcgtgtgatgatcaaccggctggacagtatttgtcaaacagttctg
aaagggaagtggccttcagctagaagaagttatgatgccaacacagtggcctctttctat
accacaaaactgctggacagccctggcgcggctacagaatatagcgaacccagcgtaccc
acacccccaggcgccggtgttaaagaagaacacgatcagtcaacacagatgtcaaaggtg
aagaagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaag
ttgacatttcagaagcaagggcttgctcagaaaagaccattcgacagcgaagacagtgcc
ctggggcagcaacagtaccttgctcggcttcgggaactgcagagtgcatcggagaccagc
ctcgccacctttcccaaatccgtgccagtatcaggtacttccattcagtcaacccttggt
gccaatggagttagattagacaaccagcctatagtcaaaaaaaggcggggaaggaggaag
aatgtagaaggtgttgacatcctcttttttaacagaaataaaccacctaatcatgtaact
gtaggcctaaccagctcccagatttctacagggataaatccagcactgtcctacactcag
cctcaaggaatgccggatacagaaagtccggttccagttattaacctgaaagatgggaca
agacttgcaggcgatgatgcgccaaagagaaaggatttggaaaaatggcttaaggagcac
ccaggttatgtggaagatttaggagcttttattcctagaatgcagctccatgaggggagg
cccaaacaaaagaggcatcggtgcagaaaccctaataaactcgatgttaatagtcttact
ggagaagaacgtgttcagctgattaacagaagaaatgccagaaaggttggaggtgcattt
gctccccctttaaaagatttatgtcgattcctgaaagaaaattcagaatatggagtggct
cctgaatggggagatgttgttaagcagtctgggtttcttccagaaagtatgtatgagcgt
attctcactggtcccgttgtgagagaggaggtcagcaggcgggggcggcggcccaaaagt
ggaattgcgaaggccacagcagcggccacagctacaactgccagcggtgtttcaggcaat
cctttgtcagccaatggattacttccaggtgtggatctcacaactcttcaggccttacag
caaaacctacaaaacttgcagtcactgcaagtgactgcagggctgatgggaatgcctgct
ggcctttcttctggaggagaagctaaaaacgtggctgccatgttccccatgctgctgtca
ggaatgactggattaccaaatctgttgggcatgggagggctcctgacaaagcctaccgaa
tctggaacagaggaaaaaaagggaaatgaccctaaggagctagaaggaaaaaaagaaagg
acagagagtcaaaattcagagaatgggggagaaaactctgtgtcaagttctccttcgaca
tcgtctactgctgcattaaatacagctgcagctgccaacccgttagctcttaacccactc
ctactctccaatatactttatccagggatgcttctcactccaggccttaatcttcatatt
ccaactttgtcccagtccaatacttttgatgtacagaaaaacaaaaacagtgacttaggc
tcatctaagtccatagaagtcaaggaggaggattccagagttagagatcaggaagacaaa
ggaggaactgaacccagtcctctcaacgaaaacagcacagatgagggttcagagaaagcc
gatgcttcatctggatctgatagtacatcgtcgtcatccgaggattcagattctagtaat
gaagactga
DBGET
integrated database retrieval system
