Leopardus geoffroyi (Geoffroy's cat): 123579205
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Entry
123579205 CDS
T10761
Symbol
CX3CL1
Name
(RefSeq) fractalkine isoform X1
KO
K05508
C-X3-C motif chemokine 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04060
Cytokine-cytokine receptor interaction
lgf04061
Viral protein interaction with cytokine and cytokine receptor
lgf04062
Chemokine signaling pathway
lgf04148
Efferocytosis
lgf04668
TNF signaling pathway
lgf05163
Human cytomegalovirus infection
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
123579205 (CX3CL1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
123579205 (CX3CL1)
04061 Viral protein interaction with cytokine and cytokine receptor
123579205 (CX3CL1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123579205 (CX3CL1)
09150 Organismal Systems
09151 Immune system
04062 Chemokine signaling pathway
123579205 (CX3CL1)
09160 Human Diseases
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
123579205 (CX3CL1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lgf04052
]
123579205 (CX3CL1)
Cytokines and neuropeptides [BR:
lgf04052
]
Cytokines
Chemokines
123579205 (CX3CL1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Extensin_1
CXCL16
Motif
Other DBs
NCBI-GeneID:
123579205
NCBI-ProteinID:
XP_045298811
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Position
E2:34439076..34450872
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AA seq
433 aa
AA seq
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MASPPLSWLLRLAALCHLTALLAGQHLGVKKCNVTCSKMTSEIPVALLVHYQRNQESCGK
HAIILRTKQNKIFCADPKEKWVQKAMEHLERQTAMPVQNGGTFEKQIGVGEPRTTLAARG
MDKSTVTEPKATRESSGQEAQRALGTSPELSTGVADSWGTRFPSTSKAPDGGPPAGSQRT
ELFNAAALTTPASWQSSAYKPGSGLWAEGKASEALPTQAPATQAPATQAPPTQASSTQTP
STQAPPTQAPSTQTLLTQAPSTQTLPTQAPTTQVPTILHTASEDQPVWISGPMPENSLGP
VEMGPISAHTDAFRGSDSMPRLSMVPVSSESVPSREPVASGSWTPKAEEPIHATVDPQRL
EVLITPVPDSQAATRRQAVGLLAFLGLLFCLGVAMFAYQSLQGCPRKMAGDMVDGLRYVP
RSCGSNSYVLVPV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccacctctctcgtggctgctccgcttggccgccctctgccatctgactgcg
cttctagccggacagcacctcggtgtgaagaaatgcaacgtcacctgcagcaagatgacc
tcggagatccctgtggctttactagtccactaccaacgaaatcaagaatcctgcggcaag
catgccatcatcttgaggaccaaacagaacaaaatcttctgtgctgatccaaaggagaaa
tgggtccagaaagccatggaacatctagagcgccagactgctatgccggtgcaaaatggc
ggcacgttcgagaagcaaattggcgtgggtgaacccaggaccaccctggctgccagggga
atggacaagtctacggtcacagagcccaaagctacccgggaaagcagtggccaggaggca
cagagggccttggggacttccccagagctgtcaacaggagtggctgattcctgggggacc
aggttcccctccacttcaaaggctccagatggagggcctccagctgggtcccagaggact
gagcttttcaacgccgctgccctcaccaccccggcgtcctggcagagctctgcctacaaa
cctgggtcgggcctctgggctgagggaaaggcctctgaggccctccccacccaggccccc
gccacccaggcccccgccacccaggccccccccacccaggcctcctccacccagaccccc
tccacccaggccccccccacccaggccccctctacccagaccctccttacccaggccccc
tccacccagaccctccctacccaggcccccactacccaggtccccaccattttacacaca
gcctcagaggaccaacctgtgtggatctctggccccatgccagagaactctctagggccc
gtggagatgggtcccatttcagctcacacggatgctttcagagggtctgacagcatgccc
cgtctctccatggtccctgtctcctcagaaagtgttcccagcagggagccagtggcctca
ggcagctggacccctaaggccgaggagcccatccatgccactgtggacccccagcggctg
gaagtcctcatcactcctgtccctgactcccaggcggccacccggaggcaggcagtaggg
ctgttggccttcctgggcctcctcttctgcctgggggtggccatgttcgcctaccaaagc
ctccagggctgcccccgcaagatggcaggggacatggtggacgggcttcgctatgtcccc
cggagctgcggcagtaactcgtacgtcctggtgcccgtgtga
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