Leopardus geoffroyi (Geoffroy's cat): 123580197
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Entry
123580197 CDS
T10761
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123580197 (CHD6)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123580197 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
123580197
NCBI-ProteinID:
XP_045300533
LinkDB
All DBs
Position
A3:18609382..18814913
Genome browser
AA seq
2720 aa
AA seq
DB search
MIMKIQKKEKQLSSLKVLNHSPMSDASVNFDYKSPSPFDHGTDQEEKIEDVASHCLPQKD
LYAAEEEAETLFPRKMTSHNGMEDSGGGGTGVKKKRKKKDPGEQEGAVKGSKDREPKPKR
KREPREPKEARKAKEPKRAKEPKEPKEPKQKDGVKKARKPREASGTKEAKEKRSGVDSAA
RTKSKKASKEQGPTPVERKKKGKRKSETTVESLELDQGLPNPSLRSPEESTESADSQKRR
SGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKI
LASKTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQ
MKHIFTEPDEDLFNPDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEED
VDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWY
NRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAI
VYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVII
DEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLE
EFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEK
NFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQA
MIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNL
RQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG
QSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLR
KGAYGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISL
DDPNFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDE
RPTRSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL
LVYCVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPE
LKNADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPA
RELDVPLPDIDYMEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDE
KSLSAEQGVTEGTSDIPERGNTDKEDNTEDKLDGLQKQMESSSDGGDGIFGEKKDDSRAA
QDGSDPDKSPWPVPSALTARLRRLVTVYQRCNRKELCRPEVLGPGNQGYWVQEEMFRRTS
EMDLINKEAQKRWTRREQADFYRAVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEH
YFYSFVAMCRNVCRLPTWKDGGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLRCPQ
LHERLQLCRPSLYLPVWWECGKHDRDLLVGTAKHGLNRTDYYIMTDPQLSFLDAYRNYAQ
HKRTDTQAPESLCCLYQTNSRLYESLTYTQMSRTSEPLENEPENLVKIESRDDHLAPPGG
SLSDMTCDNFISKVQDVISITHDESLLPESLESMMYGKKALIREPGSLQESPSTNTEPRK
DALALSASKDGNCRPAGHEAEIPSGPSFMSSLEAGVAQMNIKNGKHLLLSLSREGDVCSE
AGQRPESIGQLEAKHLASPSLDQGNESGFVDMCHLSVCDSRRSLSSDQQLIDLLENKSLE
SKLVLSQNHSEEEEEEEENEEENVGVTTGLRERPEVLHLAEPTANILREKSRGLPVDEVK
RGSLEAMSQHPRPQGAFPPAACQCHCKHTERWARGLENEEFEVDKSKGYTPDLYRSKTNS
ITVEGEPTAPPSEPFQGKHELSKEPWKENAEGKKGFPAYPEASELKSEDMDFESKDDYDR
DGNSHAQDYPGKYSEEESKSSASGIAGDLGDDLQEARAPTIAQLLQEKTLFSFSEWPKDR
VIINRLDNICHVVLKGKWPSSQQYEPPGTLPTPVLTSSAGSRSSISEPETSEHSFSSGAA
LVAQIQKESFLAPVFTKDDQKHRRPYEFEVERDAKTRGLDQFSATHRHPPIVLNGWHGES
AIDLSCTSEGSPGAASPFPLSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNG
SLRRDDAATRRRRGRRKHVEGGMDLIFLKEQTLQAGILEVHEDPGQAPSSASHPEGPVSA
ASAPEPAPAAGSQAEKAIPSKSLLDWLRQQADYSLEVPGFGANFSDKPKQRRPRCKEPGK
LDVNSLSGEERVPAVPKEPGLRGFLPENKFNHTLAEPVLRDAGPRRRGRRPRSELLKTPA
IVADSPSGMGPLFMNGLIAGMDLVGLQNMRNLPGIPLTGLVGFPAGFATMPTGEEVKSTL
SMLPMMLPGMAAVPQMFGVGGLLNAPMATACTNTAPAPLSSTTKSGTAATEKTVEDKPSS
HDVKTDTLAEDKPGPGPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMA
LPAMQQARHSEAVGLESQKRKKKKTKGDSLNPNPEPAPGSEKEPGGDQNCPEPRAPVPPE
RGHVAQAREGGLKDSNSDTN
NT seq
8163 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacaaaagaaagagaagcagttgtcaagtttaaaagttctgaatcac
tctccaatgtctgatgcctctgtcaattttgactacaaatccccctccccgtttgaccat
ggcactgatcaggaagagaagatcgaagatgttgccagtcactgtctgcctcagaaggac
ctgtatgctgctgaagaggaagctgagaccctttttcctaggaaaatgacgtcccataac
gggatggaggacagtggcggaggaggcaccggagtaaagaagaaaaggaagaaaaaggac
ccgggagagcaagagggggcagtgaagggaagcaaggacagggagcccaagccaaagagg
aagcgagagcctagagagccaaaggaagcccggaaggccaaggagcccaagagggccaag
gagcccaaggagcccaaggagcccaagcagaaggatggagtcaagaaagcacggaagccc
cgggaggcctcgggtaccaaggaggccaaagagaagaggagtggcgtggactctgcagcc
aggacgaagtccaagaaagccagcaaggagcaaggaccaaccccagtggagagaaagaag
aaaggaaagaggaaaagtgaaaccacagtggagagtttagagctggatcagggcctgccg
aacccatccctgcggagtcctgaggagtccactgagtctgcagacagccagaaacgacgc
tcaggacggcaggtgaagcgcagaaaatataacgaggacctggatttcaaggtggtggat
gatgacggggagacaatcgccgttcttggagccggccggacgtccgccctctcagcttct
acactagcatggcaggcggaggagcctccagaagatgacgcaaacatcattgagaagatc
ctggcatctaagaccgtccaggaggttcaccccggagagcccccattcgacttggagcta
ttctacgttaagtatagaaatttttcctacttgcattgtaaatgggccacaatggaagag
ctggaaaaggatcctcgcattgcacagaagatcaagcgattcaggaataaacaagcccag
atgaagcacatttttactgagcctgatgaagacttgttcaacccagactatgtagaagtt
gatcgcgtcctggaggtagcccacaccaaagatgcagaaacaggagaggaggtgacgcat
tacctggtgaagtggtgctcactgccttatgaagaaagtacgtgggaactagaagaagat
gtggatcctgcaaaagttaaagaatttgagtctcttcaagttctccctgaaattaagcat
gtggagcggcctgcttcggactcctggcagaaactggagaagtctcgagagtataagaac
agtaaccagctccgggagtaccagctggaggggatgaactggcttctttttaactggtat
aacagaaaaaattgtattttggctgatgagatggggctggggaaaaccatccagtccatc
acattcctctcagagatattcctccgaggaatccacggcccttttctcatcatcgcccca
ctctccaccatcaccaactgggagcgagagttccggacatggacagagatgaatgccatt
gtgtaccatggcagccagatcagcagacagatgatccagcagtatgagatggtgtacaga
gacgcacagggaaaccccctttcaggagtcttcaagttccacgttgtcatcacaacgttt
gagatgatcctggcagactgcccagagctgaaaaagattcactggagctgtgtgataatt
gacgaagcccacagactgaagaacaggaactgcaaacttctggagggtctaaagctcatg
gccctggaacacaaagtactgctcactgggacaccgttacagaactctgtggaggagctc
ttcagtttgctgaattttctggagccatcacaatttccttcagagactgctttcttggag
gaatttggagatctgaaaactgaggaacaggtgaagaaactgcagtctatcctaaaacca
atgatgcttcggcggctgaaagatgatgtggaaaagaaccttgctcctaaacaggagacg
atcattgaagtagagctcaccaatatccagaaaaagtactaccgtgccatcctggagaag
aacttttccttcctgaccaagggggcaaatcaacacaatatgcccaatctcatcaacacc
atgatggagctgagaaagtgctgtaaccatccctacctgatcaatggggcagaggagaaa
attctggaagatttccgaaaaacccacagccccgatgcccctgactttcagctgcaggcc
atgattcaagcagcagggaagttggtgctgattgataaactgctccctaagctgattgca
ggtggtcacaaagtcctcatcttctcccagatggtgcgctgcctcgatatcctggaagat
tatctcatccagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctg
cgccaggcagccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctg
tgcaccagagcgggaggcctggggatcaatctcacggctgctgatacctgcatcatattt
gattcagactggaacccacaaaatgacttgcaggctcaggcccgatgtcaccggataggc
cagagcaaagccgtgaaggtgtatcgtctcattactcggaactcctatgagcgggaaatg
tttgacaaagccagcctaaagctgggcctggacaaggctgttcttcaggacataaaccga
aagggcagcaccaatggggtacaacagctctcaaaaatggaagtagaggacttgctccgg
aaaggggcttatggagccctgatggacgaggaagatgaaggctccaaattctgtgaagaa
gacatagaccagattctgcagaggagaacccacaccatcaccatccagtctgaagggaaa
ggatctacttttgccaaggctagctttgtggcttcaggaaacaggacagatatttcctta
gatgacccaaacttttggcagaaatgggctaaaatagctgaattggacaccgaagcaaag
aatgaaaaggagagcttagtgatcgaccggcctcgagtgagaaagcagaccaaacactac
aactcctttgaggaggatgagctcatggagttctcggagctagacagcgactcagacgaa
aggcccacgaggtccagacgcctcaatgacaaaaccaggcgctacctccgagccgagtgt
ttccgggtagagaagaacctgctcatctttggctggggccggtggaaggacatcctgacc
cacgggcggttcaagtggcatctgaatgagaaggacatggagatgatttgccgggccctg
ctggtctactgtgtcaagcattacaagggggacgagaagatcaagagcttcatttgggaa
ctgatcacacctaccaaagacgggcaggcccagaccctccagaaccactcagggttgtct
gctccagtccccagagggaggaaggggaagaagacgaagaaccagctgctgctccctgag
ttgaagaatgcagactggctggccacctgcaaccccgaggtggtcttgcatgatgacggc
tataagaaacacctcaaacagcactgcaacaaggtccttttgcgagtccggatgctgtac
tacctaaaagctgaaatactgggagaggcagctgataaagcgtttgaaggcacccctgcc
agggagctagacgtacccctgcccgacatcgactacatggagatcccagtggattggtgg
gatgctgaggccgataagtcccttctgataggcgtgttcaaacacgggtatgagaggtac
aatgccatgcgagcagacccagcactttgcttcctggagaaagtcgggatgccagatgag
aagtctctttctgcagaacagggtgttacagaggggacctcagacattcccgagcgaggc
aacacggataaagaagacaacactgaagacaagctagatggcctgcagaaacaaatggag
agttccagcgatggaggtgatggcatttttggcgaaaagaaagatgacagccgggcagcc
caggatggctccgacccagacaaatcaccctggccagttccgtctgctctcacggctcgg
ctcagacgtctggtcaccgtgtaccagcgctgtaaccgcaaggaactctgccgaccggaa
gtcctgggaccaggtaaccaaggatactgggtccaggaagagatgttcaggagaacctca
gaaatggatctcatcaacaaggaagctcaaaagaggtggactaggagagagcaagcagac
ttctacagagcagtgtcctcctttggggttgtttatgatcaagaaaagaaaacttttgac
tggacgcagttccgcatcatttcccgtttggacaagaaatcggatgagagcctggagcac
tatttttatagctttgtggccatgtgccggaacgtctgtcgtctgcccacatggaaagat
ggtggtcccccagatcccagcatctacgtggaacccatcacggaggaacgggccgcgaga
accctgtaccgcattgagctgctgcggaaggtccgagagcaagtgctgaggtgtcctcag
ctgcacgagcgcctgcagctctgcaggcccagcctctacctcccggtctggtgggagtgt
gggaagcacgaccgagacctgctcgtcggcaccgccaagcatgggctgaaccgtactgac
tattacatcatgaccgacccccagctgtccttcctggatgcctacagaaactacgcccag
cataagagaacggacacccaggcaccagaaagtctctgttgcctttaccagaccaactcc
aggctgtatgaatctcttacgtacactcagatgagcaggacttcagagccccttgaaaat
gaacctgagaatctggtgaaaatagaaagtagagatgatcatctcgctccacctgggggc
agtttatctgacatgacttgtgacaactttatttctaaagttcaggatgtcatttccatc
acccacgatgaaagtctgctgcctgagtccttggagagcatgatgtatgggaagaaggct
ctcattcgagagccgggctctctccaggagagccccagtacaaacacagagcccagaaag
gatgctctggccctgtcggcaagcaaagatgggaactgccggcctgctggccatgaggca
gaaataccttcagggccctcttttatgagtagcttagaagcaggggtagctcagatgaac
atcaaaaatggaaaacatctgttgctgtctctttcaagggaaggggatgtctgcagtgag
gcagggcagaggcctgagagcattgggcagctagaagccaaacacttagcttccccttcc
ttggatcagggaaatgaaagtgggtttgtagatatgtgccatcttagtgtctgtgattcc
agaagaagcttgtcatcagaccagcagttaattgatttattagaaaacaaaagtttagaa
agtaaattggttttgagtcagaaccacagtgaagaggaggaggaagaggaagagaatgag
gaggagaacgtaggtgtgaccacaggcctgagggaaaggcccgaggttttgcatctagcc
gagcccactgctaatatcctaagggaaaagagccgaggcctccctgtggatgaggtcaag
agaggaagcctagaggccatgagccagcatcctagaccacagggggcttttcctccagca
gcctgtcagtgtcactgcaagcacacggagaggtgggcacgtggcctcgagaacgaggag
tttgaagtggacaaatccaagggttataccccagacctgtacagaagcaaaacgaatagt
atcacagtggagggtgagcccaccgctcctccatcagagccctttcagggaaagcacgag
ctgtcaaaagaaccttggaaggaaaatgcagaaggcaaaaaaggtttccctgcgtatcca
gaagcaagtgagctcaagtccgaagacatggattttgagagtaaagatgattacgacaga
gatgggaacagccatgctcaagattacccagggaaatactctgaagaggagagcaagagc
tcagcatcaggcattgctggagaccttggggatgacctacaggaggctcgggctcccacc
attgctcaactgctccaggagaagaccctcttttccttctctgagtggccaaaggatcgc
gtgataatcaaccgcctggataatatctgccacgtggtgttaaaggggaagtggccttcc
agccagcagtacgagcccccgggcacactgcccacccctgtgttaaccagcagtgctggt
tctcgaagcagcatctcggagccagaaacatcagaacacagcttcagcagtggtgcagca
ttggtggcccagatccagaaggagagcttcctggctccagtattcacaaaggatgaccaa
aagcacagacggccctatgagtttgaggtggagcgggatgcaaagacacggggtctggac
cagttctccgccacccacaggcacccccccatcgtcctcaatggctggcacggggagtcc
gcaatagacctctcctgcacttcagaggggtccccaggagccgcgtctcctttcccactg
agcgccagcacccctaagatcggggctatcggttcacttcaaggagccctcggcatggac
ttgtctgggattctgcaagctggcctgatccatccagtgacaggacagatcgtcaacgga
agcctcagaagagatgacgctgccacgaggaggaggagagggagacggaaacatgttgaa
ggagggatggacctcatctttttgaaggagcagacacttcaggcaggaatcttggaagtc
catgaagacccagggcaggcgccctcaagcgcctcacatccggaagggccggtgtctgcc
gcttcagcccctgagccagccccagcagctggcagccaggctgagaaagccattcccagc
aagagtctccttgactggctgaggcagcaggccgactactccttagaggttcctggcttt
ggagcaaatttttcagacaaaccaaagcagaggaggccacgctgtaaggaacctggaaaa
ttagacgtcaactccctgagtggggaagagagggttcccgctgtccccaaggagccagga
ctaaggggatttctcccagaaaacaagttcaatcacaccctggccgagcctgttcttcga
gatgcgggcccccgaaggagggggaggcggcctcggagcgagctcctgaagacccctgcc
attgtggcggactctccgtcggggatggggccactgttcatgaacggactgatcgctggg
atggacctggtaggactccagaacatgagaaatctgccaggcatccccctcacgggcctg
gtggggttcccggccggcttcgccacgatgcccacgggcgaagaggtcaaaagcaccttg
agcatgctgcccatgatgctgccgggaatggccgcagtgccccagatgttcggtgtcggg
ggactccttaacgcacccatggccactgcctgcaccaacaccgctccagcgcctctgtca
agcacaacaaaaagtggcacagcagcgaccgagaagactgtagaagacaagccgagtagc
catgatgtaaaaacggacacgttagctgaagacaagcctggtcctggtccgttttctgat
cagtccgaacctgcaataactaccagtagtcctgtggcttttaacccctttctcatccca
ggagtgtctcctggactcatttacccatccatgtttctgtccccgggcatgggcatggct
ctgccggcgatgcagcaggccagacactctgaagcagtaggtctggagagccagaagcgg
aagaagaagaaaacaaaaggggacagcctgaaccccaacccagagcctgctcccgggtcc
gaaaaggagccaggcggcgatcagaactgccccgaacccagggcccccgtccctccagag
agaggacatgtggcacaggccagggaagggggcctcaaagactccaacagtgacaccaat
tag
DBGET
integrated database retrieval system
