Leopardus geoffroyi (Geoffroy's cat): 123580328
Help
Entry
123580328 CDS
T10761
Name
(RefSeq) uncharacterized protein PB18E9.04c-like isoform X1
KO
K09445
interferon regulatory factor 4
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04659
Th17 cell differentiation
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
123580328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123580328
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
123580328
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
123580328
NCBI-ProteinID:
XP_045300889
LinkDB
All DBs
Position
A3:26878056..26890858
Genome browser
AA seq
537 aa
AA seq
DB search
MAGDPWRKEEGKVPDGRRPMAGAGGPQRLRDWLVAQIESGRYAGLRWEDAGKTLFRIPWK
HAAQQGYQAQQDAALFRAWAIHKGRHLEGIDKEDPPTWKTRLRCALNKSADFCEVRERSQ
LDISDPYKVYRIVSGSAHGPVARTCAPPGKKNILRSRQEPPGDVMELLAHRTDQASCPAS
PCSLASSVTSALGALWHCRLSCPLLQLLPRHHPCLSCQLDLFLPLLYLYYHPRPRRPLPF
ASNVCGSTAGCIRPVSSKLTPRPCHPSRLCPHLCHLCPMSITSVLIFITSVPISNTSVLT
SVTSVPSSLPPLSPCLSPLSPCLSPLSPSLSLLSQLYHVCPHLCHLCPLISATSVPMSIT
SVSISVTSVPISITSVLTSVTSVLSSLPPLSHVYHLCLHLCHLCPHLYHVCPLISATSVP
ISITSVPTSVTSVPSSLPPVPMSITSVPISITSVPTLSCLSPPLSPLSPHLCPSLSHVYH
LCPHLYHVCPLISATSVPISIASVPISITSVPISATSVPISITSVPYLLTLPSYVSP
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgacccctggcggaaggaggaggggaaggtccccgacggcaggcgaccgatg
gcgggggccgggggtccccagcgcctccgcgactggctggtggcgcagatcgagagcggg
cgctatgcggggttgcgctgggaggacgcaggcaagaccctcttccgcatcccctggaaa
cacgcggcccagcaaggctaccaggcgcagcaggacgcggcgctcttcagggcctgggcc
atacacaagggcaggcacctagagggcattgacaaggaagacccccccacatggaagacc
cggctccgctgtgccctcaacaagagtgctgacttctgtgaggtgcgtgagcgcagccag
ctggacatctccgacccctacaaggtctaccggattgtgtccggcagtgcccatggccca
gtggccaggacttgcgccccgcctgggaagaagaacatcctccggagccggcaggagccc
cctggagatgtgatggagctgctggcccacaggacagaccaggccagttgtcctgccagc
ccctgcagccttgccagctcagtcacctctgccctcggtgctctctggcactgtcgtctg
tcctgtcctcttctccagctgctgcctcgtcaccatccctgtctctcctgccagctcgac
ctcttcttacctctgctctacctctactaccaccctcggccccgccggccccttcccttc
gcctccaacgtctgcggctccaccgccggctgcatccgccctgtttcctccaaactcacc
cctcgcccctgtcatccctcgcgcctctgtccccacctctgtcacctctgtcccatgtct
atcacctctgtcctcatctttatcacttctgtccccatctctaacacctctgtcctcacc
tctgtcacctctgtcccctcatctctgccacctctgtccccatgtctgtcacctctgtct
ccatgtctatcacctctgtccccatctctatcacttctgtcccaactctatcatgtctgt
ccccacctctgtcacctctgtcccctcatctctgccacctctgtccccatgtctatcact
tctgtctccatctctgtcacctctgtccccatctctatcacctctgtcctcacctctgtc
acctctgtcctctcatctctgccacctctgtcccatgtctatcacctctgtctccatctc
tgtcacctctgtccccatctctatcatgtctgtcctctaatctctgccacctctgtcccc
atctccatcacctctgtccccacctctgtcacctctgtcccctcatctctgccacctgtc
cccatgtctatcacctctgtccccatctctatcacttctgtcccaactctatcatgtctg
tccccacctctgtcacctctgtcccctcatctctgcccatctctgtcccatgtttatcac
ctctgtccccatctctatcatgtctgtcctctaatctctgccacctctgtgcccatctct
atcgcctctgtccccatctctatcacttctgtccccatctctgccacctctgtccccatc
tctatcacctcggtcccctacctgctcactctgccctcatatgtctctccctag
DBGET
integrated database retrieval system
