Leopardus geoffroyi (Geoffroy's cat): 123580723
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Entry
123580723 CDS
T10761
Symbol
SIX3
Name
(RefSeq) homeobox protein SIX3 isoform X1
KO
K19473
homeobox protein SIX3/6
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123580723 (SIX3)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
123580723 (SIX3)
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GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
123580723
NCBI-ProteinID:
XP_045301868
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All DBs
Position
A3:64709217..64810844
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AA seq
444 aa
AA seq
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MNIYPPLLPAPGFPYLSAGQSMVFRSPLDLYSSHFLLPNFADPHHRSLLLASSGGGNGAG
GGGGGAGGGGNCAGGGGAGGAGGGGSGGGSRAPPEELSMFQLPTLNFSPEQVASVCETLE
ETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKE
SHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSL
LREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPSGM
RSLAEPGCPTHGSAESPSTAASPTTSVSSLTERADTGTSILSVRKRKLKRGQITCPRVTE
GCQGQDSIHVPWCQATFSLHYTHSLLLYCCMPSPTPTPPSSSQNSLPHDQSHWSCFDLQM
EEMFTESQGTLGKSWLNYIDRKSC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttatccgccgctgcttcctgctcccggcttcccttacctttccgcaggtcag
tccatggtattccgctcccccctagacctctattcctcccacttcttgttgccaaacttc
gctgatcctcatcaccgctccctacttctggcgagtagcggcggcgggaacggtgcgggc
ggcggcggcggcggcgcgggcggcggcgggaactgtgcgggaggcggcggtgctggcgga
gcaggcggcggcggcagcggcggcggctccagggcccccccggaagagttgtccatgttc
cagctgcccaccctcaacttctcgccggagcaggtggccagcgtctgcgagacgctggag
gagacgggcgacatcgagcggctgggccgcttcctctggtcgctgcccgtggcccccggg
gcgtgcgaggccatcaacaagcacgagtcgatcctgcgcgcgcgcgccgtggtcgccttc
cacacgggcaacttccgcgacctctaccacatcctggagaaccacaagttcaccaaggag
tctcacggcaagctgcaggccatgtggctcgaggcgcactaccaggaggccgagaagctg
cgcggccgcccgctcggcccggtggacaagtaccgcgtgcgcaagaagttcccgctgccg
cgcaccatctgggacggcgagcagaagacgcattgcttcaaggagcggactcggagcctg
ctgcgggagtggtacctgcaggacccctaccccaaccccagcaagaaacgcgaactggcg
caggccaccggcctcactcccacacaagtaggcaactggtttaagaaccggaggcagcgc
gaccgcgccgcggcggccaagaacaggctccaacaccaggccatcggaccgagcggcatg
cgttcgctggccgagcccggctgccccacgcacggctcggcagagtcgccgtctacggcg
gccagccccaccaccagcgtgtccagcctgacggagcgcgcggacaccggcacctccatc
ctctcggtgagaaaacgaaaactcaaacgaggtcagatcacatgcccaagggtcaccgag
ggatgccaaggtcaggattcaattcacgtcccctggtgccaagccaccttctctttacat
tatacacacagcctgctgctttattgttgcatgccttcccccacccccacccccccatcc
agctcccagaattcactgccgcatgaccaaagtcactggagctgcttcgatttacagatg
gaggaaatgtttacagaaagtcaggggacactcggtaagtcttggttgaattacattgac
agaaagagttgttga
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