Leopardus geoffroyi (Geoffroy's cat): 123580786
Help
Entry
123580786 CDS
T10761
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04517
IgSF CAM signaling
lgf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123580786 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123580786 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lgf04812
]
123580786 (SPTBN1)
Cytoskeleton proteins [BR:
lgf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
123580786 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
123580786 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
123580786
NCBI-ProteinID:
XP_045302013
LinkDB
All DBs
Position
A3:73130192..73330632
Genome browser
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIL
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDTLHEQASALPQEHAESPDVRGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHNMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRRRLADLKELWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKASEEMESQQQWDTSKGEQVSQNGLPTEQGSPRMAEAVDTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKTALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSIFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccaacagcagtacagcgat
gtcaacaaccgctgggatgtggatgactgggacaatgagaacagctccgcaaggctcttt
gagcggtcccgaatcaaggctctggcagatgagcgtgaagctgtgcagaagaagaccttc
accaagtgggtcaattcccaccttgcccgggtgtcctgccggatcacagacctgtacact
gaccttcgagatggacggatgctcatcaagctactggaagttctctctggagagaggctg
cctaaacccaccaagggacgaatgcgtatccactgtctggagaatgtggacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatggggtcccatgacatcgtggat
gggaaccaccggctgaccctcggcctcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtagaaactgaagacaacaaagagaagaaatctgccaaggacgcattgctg
ttgtggtgccagatgaagacagctgggtacccgaacgtcaacattcacaatttcaccacc
agctggagggacggcatggccttcaatgccctgatacacaaacaccggcctgacctgata
gatttcgacaaactaaagaaatccaatgcacactacaatctgcagaatgcgtttaatctg
gcagagcagcaccttggcctcactaaactgttggatccggaagatatcagtgtggaccac
cctgatgagaagtccattatcacttatgtggtgacttattaccactacttctctaagatg
aaggctttggctgttgaaggaaaacgaattggaaaggtgcttgacaatgctattgaaaca
gaaaaaatgattgaaaagtatgagtcacttgcctctgatcttctggagtggattgaacaa
accatcattatattgaacaatcgcaaatttgccaattctctggttggggttcaacaacag
cttcaggcttttaacacttaccgcactgtggagaaaccacccaagtttactgagaagggg
aacttggaagtgctgctttttactattcagagcaagatgagggccaacaatcagaaggtc
tacatgccccgggagggcaagctcatctctgacattaacaaggcctgggaaagactggaa
aaagcggaacacgagcgagaactggctctgcggaacgagctcatcagacaggagaaactg
gaacagctcgcccgcagattcgatcgcaaggcagctatgagggagacctggctgagcgaa
aaccagcgtctggtgtctcaggacaactttggttttgaccttcctgctgttgaggccgcc
acaaaaaagcacgaggccattgagacagacatcgccgcatacgaggaacgtgtgcaggcg
gtggtagcagtggccagggagcttgaggcggagaactaccacgacatcaagcgcatcaca
gcaaggaaagacaatgtcatccggctctgggagtacctgctggaactgctcagggcccgg
aggcagcgtcttgagatgaacctggggctgcaaaagatattccaggaaatgctctacatt
atggactggatggacgaaatgaaggtgctattactgtctcaagactatggcaagcacttg
cttggtgtggaagacctgttacagaagcacgccctggttgaagcggacattggcatccag
gcagagcgagtgagaggcgtcaatgcctctgcccagaagttcgcaacagacggggaaggt
tacaagccctgtgaccctcaggtgatccgagaccgcgtggcccacatggagttctgttac
caagaactctgccagctggcagccgaacgccgggctcggctggaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaagaggagggctggatacgagagaaggagaagatc
ctgtcctccgacgattatgggaaggacctgaccagcgtcatgcgcttgctcagcaagcac
cgggcattcgaggatgagatgagcggccgcagtggccatttcgagcaggccatcaaagaa
ggtgaagacatgatcgcggaggagcactttgggtcagagaagatccgagagcggatcctt
tacatccgggagcagtgggccaacctggagcagctctcggccatccggaagaagcgcctg
gaggaggcctcgctgctacaccagttccaggcagacgccgacgacattgacgcgtggatg
ctggacatcctcaagattgtctccagcaatgacgtgggccatgacgagtactccacgcag
tctctggtcaagaaacacaaggatgtggcagaggagatcgccaactataggcccaccatc
gacacgctgcacgagcaggccagcgccctcccccaggagcatgccgagtctccagatgtg
aggggccggctgtcaggcatcgaggaacggtacaaggaggtggcagagctgacgcggctg
aggaagcaggcactgcaggacaccctggccttgtacaagatgttcagtgaggctgatgcc
tgtgagctctggatcgacgagaaggagcagtggctcaacaacatgcagatcccagaaaaa
ctggaggacctggaagtcatccagcacagatttgagagccttgagcctgaaatgaacaac
caggcttcccgggtcgcagtggtgaaccagattgcacgacagctcatgcacagtggccac
ccaagtgagaaggagatcaaagcccagcaggacaaactcaacacaaggtggagtcagttc
cgagagctggtcgacaggaagaaggacgctcttctctctgccctgagcatacagaactac
caccttgagtgcaatgaaaccaaatcctggattcgagaaaagacaaaggtcatcgagtcc
acccaggacctgggcaacgacctggccggcgtcatggccctgcagcgcaagctgaccggc
atggagcgggacctggtggccattgaggcaaagctgagcgacctgcagaaagaggcggag
aagctcgagtccgagcaccccgaccaggctcaggccatcctgtctcggctggccgagatc
agtgacgtgtgggaggagatgaagacaaccctgaaaaaccgcgaggcctccctgggagag
gccagcaagctgcagcagttcctgcgggacctggacgacttccagtcctggctctcccgg
acccagacggccatcgcctctgaggacatgcccaacaccctgactgaggcggagaagctc
ctcacgcagcatgagaacatcaaaaacgagatcgacaactacgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggacagaccgacgcccagtacatgtttctg
cggcagcggctgcaggccctggacaccgggtggaacgagctgcacaaaatgtgggagaac
aggcagaatctcctgtcccagtcacatgcctaccagcagttccttagggacacgaagcag
gccgaggccttccttaacaaccaggagtatgttttggctcatactgaaatgcctaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggacttcatgactaccatggatgcc
aatgaggagaagatcaatgctgtcgtggagacaggccggaggctggtgagcgatggaaac
atcaactcagatcgcatccaggagaaggtggactccattgatgacagacataggaagaat
cgcgaggcagccagcgagcttctgatgcgtttgaaggacaaccgggatcttcagaaattc
ctgcaagattgtcaggagttatctctttggatcaatgaaaagatgcttactgcccaggac
atgtcttacgatgaagccagaaatctgcatagtaaatggttaaaacatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagcctgagacggaagctgtggtgaaggaaaaactcactggtttacataac
atgtgggaagtcctcgagtccaccacccagaccaaggcccagcggctctttgatgcaaac
aaggctgaacttttcacccagagctgtgcagatctggacaaatggctgcacggcctggag
agtcagattcagtctgatgactatggcaaagaccttaccagcgtcaacatcctgcttaaa
aagcaacagatgctggagaaccagatggaggtgcggaagaaggagatcgaggagctccag
agccaggcccaggccctgagtcaggaggggaagagcactgacgaggtggacagcaagcgc
ctcactgtgcagaccaagttcatggaactgctggagcccttgaatgaaagaaagcataat
ctgctggcctctaaagagatccatcagttcaacagggatgtggaggatgagattttgtgg
gttggagagaggatgcctttggcaacttccacagatcatggccacaacctccagactgtg
cagctgttaataaagaaaaatcagaccctccagaaagaaatccaggggcaccagcctcgc
attgatgacatctttgagaggagccaaaacattgtcaccgacagcagcagcctcaacgcc
gaagccattcgacggaggctcgctgacctcaaggagctatggggtctcctcattgaggag
accgagaagcgccacaggcggcttgaggaggcgcacagggcccagcagtactacttcgat
gctgctgaggctgaggcgtggatgagcgagcaagagctgtacatgatgtctgaggagaag
gccaaggatgagcagagcgccgtctccatgttgaagaagcaccagattctggaacaagcc
gtggaggactatgcagagaccgtgcatcagctctctaagaccagccgggccctggtggct
gacagccatccggaaagtgagcgcatcagcatgcggcagtccaaagtggacaagctgtac
gcgggtctgaaagacctggccgaagagcggaggggcaagctggacgagaggcacaggctc
ttccagctcaaccgggaggtggacgacctggagcagtggatcgctgagagggaggtggtc
gcagggtcgcatgagttggggcaggactacgagcatgtcacgatgttacaagaacgattc
cgggaatttgccagagacacagggaacattggacaggagcgtgtggacacagtcaatcac
atggcagatgagctcatcaactctggtcattcggatgccgccaccatcgccgagtggaag
gatgggctcaacgaagcctgggctgacctcctggagctcatcgacacgagaacacagatt
ctcgccgcctcttatgaactgcacaagttttaccatgatgccaaggagatctttgggcgc
atacaggacaaacacaagaaactccccgaggagcttgggagagatcagaacacagtggag
accttacagagaatgcacaccacgtttgagcatgacatccaggctctgggcactcaggtc
aggcagctgcaggaggatgcggcccgtctacaggcagcctacgcgggtgacaaggctgac
gacatccagaagcgggagaatgaggtcctggaagcctggaaggctctgctggatgcctgt
gagggccgcagggtgcggctggtggacacgggggacaagttccgcttcttcagcatggta
cgagacctcatgctgtggatggaagacgtcatccggcagattgaagcccaggagaagcca
agggatgtatcatctgttgaactattaatgaataatcatcaaggtatcaaagctgaaatc
gatgctcgtaatgacagctttacaacttgcattgaacttgggaaatccctactggcgagg
aagcactatgcatctgaggagatcaaggaaaagctattgcagttgacggaaaagagaaaa
gaaatgattgacaagtgggaagaccgatgggaatggttaagactgattttggaggtccac
cagttctcacgggacgccagtgtggccgaggcctggctgctcggacaagagccataccta
tccagccgagaaataggccagagtgtggatgaggtggagaagctcatcaagcgccacgag
gcttttgaaaagtctgcagcaacctgggacgagaggttctctgccctggaaaggttgaca
acgttggagttactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggccg
ccctctcccgagccgagcacgaaggcttccgaggagatggagtcccagcagcagtgggat
acctcaaaaggagagcaagtttcccagaacggtttgccgactgaacagggatctccacgg
atggcagaagcggtggacacaagcgaaatggtcaacggcgccgcagagcaaagaacaagc
tcaaaggagtctagccccatcccctcccccacgtccgaccgcaaagccaagactgccctc
ccggcccagagtgccgccaccttgccggccagaacccaggagacgccttcggcccagatg
gaaggcttcctgaatcggaagcacgagtgggaggctcacaataagaaagcctcaagcagg
tcctggcacaatgtttattgtgtcataaataaccaagaaatgggtttctacaaagatgca
aagaccgctgcctctggaattccctaccacagtgaggtccctgtgagtttgaaagaagcc
atctgtgaagtggcccttgattacaagaagaagaaacacgtgttcaagctaagactaaat
gatggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacatggatccag
gccatctcctccgccatctcctctgataaacacgaggtgtccgccagcacccagagcacg
ccagcatccagccgggcacagaccttgcccaccagcgtcgtcaccatcaccagcgagtct
agccctggcaagcgggagaaggacaaagagaaagacaaggagaagaggttcagcattttt
ggcaaaaagaagtga
DBGET
integrated database retrieval system
