Leopardus geoffroyi (Geoffroy's cat): 123581337
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Entry
123581337 CDS
T10761
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123581337 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgf04121
]
123581337 (TRIM54)
Ubiquitin system [BR:
lgf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123581337 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
DUF349
Sina_RING
UvrD_C
PHP
MIF4G_like_2
Zn_ribbon_FGT1_2
DUF1421
FUSC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
123581337
NCBI-ProteinID:
XP_045303317
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All DBs
Position
A3:complement(118636360..118659620)
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AA seq
366 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLTQRFEALCAVLEERKAELLQALAREQE
QKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMDQFTVSVEHVAEMLRTIDFQAGASGEEEDEEVALEGEEGSAGPEEERPDGP
EGTGGH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccagtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctcgaaccct
ctgtggcagtcccggggctccaccactgtgtcttccggaggccgtttccgctgcccatct
tgcaggcatgaggttgtcctggacagacatggcgtctatggcctgcagcgaaacctacta
gtggagaacattatcgacatttacaaacaagagtcttcccggccactgcactccaaggct
gagcagcaccttatgtgtgaggagcatgaagaggagaagatcaatatctactgcctgagc
tgtgaagtgcccacctgctctctctgtaaggtcttcggtgcccacaaggactgtgaggtg
gcccccctgcccaccatttacaaacgccagaagagtgagctcagcgatggaatcgcaatg
ctggtggccggcaacgaccgcgtgcaggcagtgatcacacagatggaggaggtgtgccag
accatagaggacaacagccggcggcagaagcagttactaacccagaggttcgaggccctg
tgcgcggtgctggaagagcgcaaggctgagttgctgcaggcgctggcccgcgagcaggag
cagaagctgcagcgcgtgcggggcctcatccgccagtacggagaccacctggaggcctcc
tctaagctcgtggagtcggccatccagtccatggaggagccacagatggcgctctacctc
cagcaggccaaggagctgatcaataaggtcgggacaatgtcgaaagtggagctggcagga
cggccagagccgggctatgaaagcatggatcagttcaccgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccaggcgggcgcttccggggaggaagaggatgaggag
gtggcgttggagggggaagagggcagcgcggggccagaggaagagcggccggatgggccg
gaaggcaccggcgggcactga
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integrated database retrieval system
